Protein–RNA interactions for Protein: F6R3J9

Gm8879, Predicted gene 8879, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm8879F6R3J9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24,71■■□□□ 1,55
Gm8879F6R3J9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24,7■■□□□ 1,54
Gm8879F6R3J9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24,68■■□□□ 1,54
Gm8879F6R3J9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24,67■■□□□ 1,54
Gm8879F6R3J9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24,67■■□□□ 1,54
Gm8879F6R3J9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24,66■■□□□ 1,54
Gm8879F6R3J9 AL845457.1-201ENSMUST00000197244 68 ntBASIC24,66■■□□□ 1,54
Gm8879F6R3J9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24,66■■□□□ 1,54
Gm8879F6R3J9 Mipep-204ENSMUST00000225043 1548 ntBASIC24,64■■□□□ 1,53
Gm8879F6R3J9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24,63■■□□□ 1,53
Gm8879F6R3J9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24,62■■□□□ 1,53
Gm8879F6R3J9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24,6■■□□□ 1,53
Gm8879F6R3J9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24,59■■□□□ 1,53
Gm8879F6R3J9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24,59■■□□□ 1,53
Gm8879F6R3J9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24,59■■□□□ 1,53
Gm8879F6R3J9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24,59■■□□□ 1,53
Gm8879F6R3J9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24,58■■□□□ 1,53
Gm8879F6R3J9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24,58■■□□□ 1,52
Gm8879F6R3J9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24,56■■□□□ 1,52
Gm8879F6R3J9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24,56■■□□□ 1,52
Gm8879F6R3J9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24,55■■□□□ 1,52
Gm8879F6R3J9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24,55■■□□□ 1,52
Gm8879F6R3J9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24,54■■□□□ 1,52
Gm8879F6R3J9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24,53■■□□□ 1,52
Gm8879F6R3J9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24,51■■□□□ 1,51
Gm8879F6R3J9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24,5■■□□□ 1,51
Gm8879F6R3J9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24,49■■□□□ 1,51
Gm8879F6R3J9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24,49■■□□□ 1,51
Gm8879F6R3J9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24,47■■□□□ 1,51
Gm8879F6R3J9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24,47■■□□□ 1,51
Gm8879F6R3J9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24,44■■□□□ 1,5
Gm8879F6R3J9 Gm25262-201ENSMUST00000174934 133 ntBASIC24,43■■□□□ 1,5
Gm8879F6R3J9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24,43■■□□□ 1,5
Gm8879F6R3J9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24,42■■□□□ 1,5
Gm8879F6R3J9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24,42■■□□□ 1,5
Gm8879F6R3J9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24,39■■□□□ 1,49
Gm8879F6R3J9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24,39■■□□□ 1,49
Gm8879F6R3J9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24,37■■□□□ 1,49
Gm8879F6R3J9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24,37■■□□□ 1,49
Gm8879F6R3J9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24,37■■□□□ 1,49
Gm8879F6R3J9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24,37■■□□□ 1,49
Gm8879F6R3J9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24,34■■□□□ 1,49
Gm8879F6R3J9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24,32■■□□□ 1,48
Gm8879F6R3J9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24,32■■□□□ 1,48
Gm8879F6R3J9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24,32■■□□□ 1,48
Gm8879F6R3J9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24,31■■□□□ 1,48
Gm8879F6R3J9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24,31■■□□□ 1,48
Gm8879F6R3J9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24,31■■□□□ 1,48
Gm8879F6R3J9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24,31■■□□□ 1,48
Gm8879F6R3J9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24,31■■□□□ 1,48
Gm8879F6R3J9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24,3■■□□□ 1,48
Gm8879F6R3J9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24,29■■□□□ 1,48
Gm8879F6R3J9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24,28■■□□□ 1,48
Gm8879F6R3J9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24,28■■□□□ 1,48
Gm8879F6R3J9 Gm9905-201ENSMUST00000065740 1845 ntBASIC24,28■■□□□ 1,48
Gm8879F6R3J9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24,27■■□□□ 1,48
Gm8879F6R3J9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24,26■■□□□ 1,47
Gm8879F6R3J9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24,26■■□□□ 1,47
Gm8879F6R3J9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24,26■■□□□ 1,47
Gm8879F6R3J9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24,24■■□□□ 1,47
Gm8879F6R3J9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24,24■■□□□ 1,47
Gm8879F6R3J9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24,23■■□□□ 1,47
Gm8879F6R3J9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24,22■■□□□ 1,47
Gm8879F6R3J9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24,21■■□□□ 1,47
Gm8879F6R3J9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24,21■■□□□ 1,47
Gm8879F6R3J9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24,19■■□□□ 1,46
Gm8879F6R3J9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24,19■■□□□ 1,46
Gm8879F6R3J9 Zxda-201ENSMUST00000117281 2621 ntBASIC24,17■■□□□ 1,46
Gm8879F6R3J9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24,16■■□□□ 1,46
Gm8879F6R3J9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24,15■■□□□ 1,46
Gm8879F6R3J9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24,15■■□□□ 1,46
Gm8879F6R3J9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24,14■■□□□ 1,46
Gm8879F6R3J9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24,13■■□□□ 1,45
Gm8879F6R3J9 Gm6206-201ENSMUST00000133472 2199 ntBASIC24,13■■□□□ 1,45
Gm8879F6R3J9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24,12■■□□□ 1,45
Gm8879F6R3J9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24,12■■□□□ 1,45
Gm8879F6R3J9 AC166822.3-201ENSMUST00000227394 661 ntBASIC24,1■■□□□ 1,45
Gm8879F6R3J9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24,08■■□□□ 1,44
Gm8879F6R3J9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24,08■■□□□ 1,44
Gm8879F6R3J9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24,08■■□□□ 1,44
Gm8879F6R3J9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24,08■■□□□ 1,44
Gm8879F6R3J9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24,07■■□□□ 1,44
Gm8879F6R3J9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24,07■■□□□ 1,44
Gm8879F6R3J9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24,06■■□□□ 1,44
Gm8879F6R3J9 Gm27322-201ENSMUST00000184007 104 ntBASIC24,05■■□□□ 1,44
Gm8879F6R3J9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24,04■■□□□ 1,44
Gm8879F6R3J9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24,03■■□□□ 1,44
Gm8879F6R3J9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24,03■■□□□ 1,44
Gm8879F6R3J9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24,03■■□□□ 1,44
Gm8879F6R3J9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24,03■■□□□ 1,44
Gm8879F6R3J9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24,02■■□□□ 1,44
Gm8879F6R3J9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24,02■■□□□ 1,44
Gm8879F6R3J9 Gm17082-201ENSMUST00000166043 1091 ntBASIC24,02■■□□□ 1,44
Gm8879F6R3J9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24,02■■□□□ 1,44
Gm8879F6R3J9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24,01■■□□□ 1,43
Gm8879F6R3J9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24,01■■□□□ 1,43
Gm8879F6R3J9 Gm43445-201ENSMUST00000198564 2091 ntBASIC24,01■■□□□ 1,43
Gm8879F6R3J9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24,01■■□□□ 1,43
Gm8879F6R3J9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24■■□□□ 1,43
Gm8879F6R3J9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1,43
Retrieved 100 of 76,532 protein–RNA pairs in 50,7 ms