Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkx6-2D3Z4R4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Nkx6-2D3Z4R4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx6-2D3Z4R4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nkx6-2D3Z4R4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx6-2D3Z4R4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx6-2D3Z4R4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx6-2D3Z4R4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx6-2D3Z4R4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx6-2D3Z4R4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx6-2D3Z4R4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx6-2D3Z4R4 Gm24109-201ENSMUST00000175489 103 ntBASIC21.01■□□□□ 0.95
Nkx6-2D3Z4R4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx6-2D3Z4R4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx6-2D3Z4R4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx6-2D3Z4R4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx6-2D3Z4R4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Nkx6-2D3Z4R4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx6-2D3Z4R4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx6-2D3Z4R4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx6-2D3Z4R4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx6-2D3Z4R4 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.97■□□□□ 0.95
Nkx6-2D3Z4R4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
Nkx6-2D3Z4R4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx6-2D3Z4R4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Nkx6-2D3Z4R4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx6-2D3Z4R4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Nkx6-2D3Z4R4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx6-2D3Z4R4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx6-2D3Z4R4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Nkx6-2D3Z4R4 Gm23366-201ENSMUST00000175022 89 ntBASIC20.91■□□□□ 0.94
Nkx6-2D3Z4R4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx6-2D3Z4R4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx6-2D3Z4R4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx6-2D3Z4R4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx6-2D3Z4R4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx6-2D3Z4R4 Amer2-203ENSMUST00000225247 2662 ntBASIC20.87■□□□□ 0.93
Nkx6-2D3Z4R4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Nkx6-2D3Z4R4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx6-2D3Z4R4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx6-2D3Z4R4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Nkx6-2D3Z4R4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nkx6-2D3Z4R4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.82■□□□□ 0.92
Nkx6-2D3Z4R4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.82■□□□□ 0.92
Nkx6-2D3Z4R4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx6-2D3Z4R4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx6-2D3Z4R4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx6-2D3Z4R4 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.78■□□□□ 0.92
Nkx6-2D3Z4R4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx6-2D3Z4R4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx6-2D3Z4R4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx6-2D3Z4R4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx6-2D3Z4R4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Nkx6-2D3Z4R4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx6-2D3Z4R4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nkx6-2D3Z4R4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx6-2D3Z4R4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx6-2D3Z4R4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx6-2D3Z4R4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx6-2D3Z4R4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx6-2D3Z4R4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx6-2D3Z4R4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Nkx6-2D3Z4R4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx6-2D3Z4R4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx6-2D3Z4R4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx6-2D3Z4R4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx6-2D3Z4R4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx6-2D3Z4R4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.69■□□□□ 0.9
Nkx6-2D3Z4R4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx6-2D3Z4R4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.69■□□□□ 0.9
Nkx6-2D3Z4R4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx6-2D3Z4R4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Nkx6-2D3Z4R4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx6-2D3Z4R4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx6-2D3Z4R4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx6-2D3Z4R4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx6-2D3Z4R4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx6-2D3Z4R4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx6-2D3Z4R4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx6-2D3Z4R4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Nkx6-2D3Z4R4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx6-2D3Z4R4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Nkx6-2D3Z4R4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx6-2D3Z4R4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx6-2D3Z4R4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx6-2D3Z4R4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx6-2D3Z4R4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx6-2D3Z4R4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Nkx6-2D3Z4R4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Nkx6-2D3Z4R4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx6-2D3Z4R4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx6-2D3Z4R4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx6-2D3Z4R4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx6-2D3Z4R4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Nkx6-2D3Z4R4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Nkx6-2D3Z4R4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Nkx6-2D3Z4R4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx6-2D3Z4R4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx6-2D3Z4R4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx6-2D3Z4R4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms