Protein–RNA interactions for Protein: A0A0G2JGD3

Tmem116, Transmembrane protein 116 (Fragment), mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem116A0A0G2JGD3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tmem116A0A0G2JGD3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Tmem116A0A0G2JGD3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Tmem116A0A0G2JGD3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.88■■□□□ 1.09
Tmem116A0A0G2JGD3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tmem116A0A0G2JGD3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tmem116A0A0G2JGD3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Tmem116A0A0G2JGD3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tmem116A0A0G2JGD3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tmem116A0A0G2JGD3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tmem116A0A0G2JGD3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Tmem116A0A0G2JGD3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Tmem116A0A0G2JGD3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Tmem116A0A0G2JGD3 Peli2-204ENSMUST00000226513 1320 ntBASIC21.81■■□□□ 1.08
Tmem116A0A0G2JGD3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tmem116A0A0G2JGD3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tmem116A0A0G2JGD3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tmem116A0A0G2JGD3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tmem116A0A0G2JGD3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Tmem116A0A0G2JGD3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tmem116A0A0G2JGD3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.76■■□□□ 1.07
Tmem116A0A0G2JGD3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Tmem116A0A0G2JGD3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tmem116A0A0G2JGD3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Tmem116A0A0G2JGD3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Tmem116A0A0G2JGD3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.73■■□□□ 1.07
Tmem116A0A0G2JGD3 Gm16148-201ENSMUST00000119653 893 ntBASIC21.72■■□□□ 1.07
Tmem116A0A0G2JGD3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tmem116A0A0G2JGD3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Tmem116A0A0G2JGD3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Tmem116A0A0G2JGD3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tmem116A0A0G2JGD3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Tmem116A0A0G2JGD3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tmem116A0A0G2JGD3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tmem116A0A0G2JGD3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.66■■□□□ 1.06
Tmem116A0A0G2JGD3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tmem116A0A0G2JGD3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
Tmem116A0A0G2JGD3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tmem116A0A0G2JGD3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tmem116A0A0G2JGD3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tmem116A0A0G2JGD3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tmem116A0A0G2JGD3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tmem116A0A0G2JGD3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tmem116A0A0G2JGD3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tmem116A0A0G2JGD3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tmem116A0A0G2JGD3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tmem116A0A0G2JGD3 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.55■■□□□ 1.04
Tmem116A0A0G2JGD3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tmem116A0A0G2JGD3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Tmem116A0A0G2JGD3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.5■■□□□ 1.03
Tmem116A0A0G2JGD3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Tmem116A0A0G2JGD3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tmem116A0A0G2JGD3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tmem116A0A0G2JGD3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tmem116A0A0G2JGD3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tmem116A0A0G2JGD3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tmem116A0A0G2JGD3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tmem116A0A0G2JGD3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.47■■□□□ 1.03
Tmem116A0A0G2JGD3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tmem116A0A0G2JGD3 Zfp131-205ENSMUST00000223812 663 ntBASIC21.46■■□□□ 1.03
Tmem116A0A0G2JGD3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Tmem116A0A0G2JGD3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tmem116A0A0G2JGD3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Tmem116A0A0G2JGD3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.44■■□□□ 1.02
Tmem116A0A0G2JGD3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.43■■□□□ 1.02
Tmem116A0A0G2JGD3 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.43■■□□□ 1.02
Tmem116A0A0G2JGD3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Tmem116A0A0G2JGD3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Tmem116A0A0G2JGD3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
Tmem116A0A0G2JGD3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tmem116A0A0G2JGD3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
Tmem116A0A0G2JGD3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.38■■□□□ 1.01
Tmem116A0A0G2JGD3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tmem116A0A0G2JGD3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tmem116A0A0G2JGD3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tmem116A0A0G2JGD3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.36■■□□□ 1.01
Tmem116A0A0G2JGD3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tmem116A0A0G2JGD3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
Tmem116A0A0G2JGD3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tmem116A0A0G2JGD3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tmem116A0A0G2JGD3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.34■■□□□ 1.01
Tmem116A0A0G2JGD3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tmem116A0A0G2JGD3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tmem116A0A0G2JGD3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tmem116A0A0G2JGD3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tmem116A0A0G2JGD3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Tmem116A0A0G2JGD3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tmem116A0A0G2JGD3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tmem116A0A0G2JGD3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.29■■□□□ 1
Tmem116A0A0G2JGD3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.28■■□□□ 1
Tmem116A0A0G2JGD3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Tmem116A0A0G2JGD3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.27■■□□□ 1
Tmem116A0A0G2JGD3 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.27■■□□□ 1
Tmem116A0A0G2JGD3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.27■■□□□ 1
Tmem116A0A0G2JGD3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tmem116A0A0G2JGD3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.26■□□□□ 0.99
Tmem116A0A0G2JGD3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.26■□□□□ 0.99
Tmem116A0A0G2JGD3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Tmem116A0A0G2JGD3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Tmem116A0A0G2JGD3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms