Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav13n-1A0A0G2JEU8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav13n-1A0A0G2JEU8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav13n-1A0A0G2JEU8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav13n-1A0A0G2JEU8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trav13n-1A0A0G2JEU8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav13n-1A0A0G2JEU8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav13n-1A0A0G2JEU8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trav13n-1A0A0G2JEU8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav13n-1A0A0G2JEU8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav13n-1A0A0G2JEU8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav13n-1A0A0G2JEU8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav13n-1A0A0G2JEU8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav13n-1A0A0G2JEU8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav13n-1A0A0G2JEU8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trav13n-1A0A0G2JEU8 Gm16148-201ENSMUST00000119653 893 ntBASIC18.6■□□□□ 0.57
Trav13n-1A0A0G2JEU8 Zfp131-205ENSMUST00000223812 663 ntBASIC18.6■□□□□ 0.57
Trav13n-1A0A0G2JEU8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav13n-1A0A0G2JEU8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13n-1A0A0G2JEU8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav13n-1A0A0G2JEU8 Peli2-204ENSMUST00000226513 1320 ntBASIC18.57■□□□□ 0.56
Trav13n-1A0A0G2JEU8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav13n-1A0A0G2JEU8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav13n-1A0A0G2JEU8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav13n-1A0A0G2JEU8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trav13n-1A0A0G2JEU8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav13n-1A0A0G2JEU8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trav13n-1A0A0G2JEU8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav13n-1A0A0G2JEU8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav13n-1A0A0G2JEU8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trav13n-1A0A0G2JEU8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav13n-1A0A0G2JEU8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.51■□□□□ 0.55
Trav13n-1A0A0G2JEU8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav13n-1A0A0G2JEU8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav13n-1A0A0G2JEU8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav13n-1A0A0G2JEU8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav13n-1A0A0G2JEU8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trav13n-1A0A0G2JEU8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.48■□□□□ 0.55
Trav13n-1A0A0G2JEU8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.48■□□□□ 0.55
Trav13n-1A0A0G2JEU8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav13n-1A0A0G2JEU8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav13n-1A0A0G2JEU8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav13n-1A0A0G2JEU8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav13n-1A0A0G2JEU8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav13n-1A0A0G2JEU8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav13n-1A0A0G2JEU8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.45■□□□□ 0.54
Trav13n-1A0A0G2JEU8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav13n-1A0A0G2JEU8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav13n-1A0A0G2JEU8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav13n-1A0A0G2JEU8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav13n-1A0A0G2JEU8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Trav13n-1A0A0G2JEU8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav13n-1A0A0G2JEU8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav13n-1A0A0G2JEU8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trav13n-1A0A0G2JEU8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.35■□□□□ 0.53
Trav13n-1A0A0G2JEU8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav13n-1A0A0G2JEU8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trav13n-1A0A0G2JEU8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav13n-1A0A0G2JEU8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trav13n-1A0A0G2JEU8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.32■□□□□ 0.52
Trav13n-1A0A0G2JEU8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav13n-1A0A0G2JEU8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav13n-1A0A0G2JEU8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav13n-1A0A0G2JEU8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav13n-1A0A0G2JEU8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav13n-1A0A0G2JEU8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Trav13n-1A0A0G2JEU8 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.26■□□□□ 0.51
Trav13n-1A0A0G2JEU8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.25■□□□□ 0.51
Trav13n-1A0A0G2JEU8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav13n-1A0A0G2JEU8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.23■□□□□ 0.51
Trav13n-1A0A0G2JEU8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav13n-1A0A0G2JEU8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav13n-1A0A0G2JEU8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trav13n-1A0A0G2JEU8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.21■□□□□ 0.51
Trav13n-1A0A0G2JEU8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav13n-1A0A0G2JEU8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav13n-1A0A0G2JEU8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Trav13n-1A0A0G2JEU8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trav13n-1A0A0G2JEU8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav13n-1A0A0G2JEU8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.18■□□□□ 0.5
Trav13n-1A0A0G2JEU8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13n-1A0A0G2JEU8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav13n-1A0A0G2JEU8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav13n-1A0A0G2JEU8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav13n-1A0A0G2JEU8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.14■□□□□ 0.49
Trav13n-1A0A0G2JEU8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav13n-1A0A0G2JEU8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13n-1A0A0G2JEU8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13n-1A0A0G2JEU8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13n-1A0A0G2JEU8 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.13■□□□□ 0.49
Trav13n-1A0A0G2JEU8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13n-1A0A0G2JEU8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav13n-1A0A0G2JEU8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav13n-1A0A0G2JEU8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav13n-1A0A0G2JEU8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav13n-1A0A0G2JEU8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav13n-1A0A0G2JEU8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.1■□□□□ 0.49
Trav13n-1A0A0G2JEU8 Gm45855-201ENSMUST00000212546 880 ntBASIC18.1■□□□□ 0.49
Trav13n-1A0A0G2JEU8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav13n-1A0A0G2JEU8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms