Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BC053393A0A0B4J1F6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
BC053393A0A0B4J1F6 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.71■□□□□ 0.91
BC053393A0A0B4J1F6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BC053393A0A0B4J1F6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
BC053393A0A0B4J1F6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BC053393A0A0B4J1F6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BC053393A0A0B4J1F6 Gm25262-201ENSMUST00000174934 133 ntBASIC20.68■□□□□ 0.9
BC053393A0A0B4J1F6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BC053393A0A0B4J1F6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
BC053393A0A0B4J1F6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BC053393A0A0B4J1F6 Zxda-201ENSMUST00000117281 2621 ntBASIC20.68■□□□□ 0.9
BC053393A0A0B4J1F6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BC053393A0A0B4J1F6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BC053393A0A0B4J1F6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BC053393A0A0B4J1F6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.65■□□□□ 0.9
BC053393A0A0B4J1F6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BC053393A0A0B4J1F6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BC053393A0A0B4J1F6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.62■□□□□ 0.89
BC053393A0A0B4J1F6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BC053393A0A0B4J1F6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BC053393A0A0B4J1F6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BC053393A0A0B4J1F6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BC053393A0A0B4J1F6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BC053393A0A0B4J1F6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BC053393A0A0B4J1F6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BC053393A0A0B4J1F6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BC053393A0A0B4J1F6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
BC053393A0A0B4J1F6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BC053393A0A0B4J1F6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BC053393A0A0B4J1F6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BC053393A0A0B4J1F6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.52■□□□□ 0.88
BC053393A0A0B4J1F6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BC053393A0A0B4J1F6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BC053393A0A0B4J1F6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BC053393A0A0B4J1F6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BC053393A0A0B4J1F6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BC053393A0A0B4J1F6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.46■□□□□ 0.87
BC053393A0A0B4J1F6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
BC053393A0A0B4J1F6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BC053393A0A0B4J1F6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BC053393A0A0B4J1F6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BC053393A0A0B4J1F6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
BC053393A0A0B4J1F6 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.42■□□□□ 0.86
BC053393A0A0B4J1F6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BC053393A0A0B4J1F6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BC053393A0A0B4J1F6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BC053393A0A0B4J1F6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BC053393A0A0B4J1F6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BC053393A0A0B4J1F6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BC053393A0A0B4J1F6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BC053393A0A0B4J1F6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
BC053393A0A0B4J1F6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BC053393A0A0B4J1F6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BC053393A0A0B4J1F6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
BC053393A0A0B4J1F6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
BC053393A0A0B4J1F6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BC053393A0A0B4J1F6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BC053393A0A0B4J1F6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BC053393A0A0B4J1F6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
BC053393A0A0B4J1F6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
BC053393A0A0B4J1F6 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.34■□□□□ 0.85
BC053393A0A0B4J1F6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BC053393A0A0B4J1F6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
BC053393A0A0B4J1F6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
BC053393A0A0B4J1F6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
BC053393A0A0B4J1F6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
BC053393A0A0B4J1F6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.28■□□□□ 0.84
BC053393A0A0B4J1F6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BC053393A0A0B4J1F6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BC053393A0A0B4J1F6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BC053393A0A0B4J1F6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BC053393A0A0B4J1F6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BC053393A0A0B4J1F6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BC053393A0A0B4J1F6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BC053393A0A0B4J1F6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BC053393A0A0B4J1F6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BC053393A0A0B4J1F6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BC053393A0A0B4J1F6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.21■□□□□ 0.83
BC053393A0A0B4J1F6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.21■□□□□ 0.83
BC053393A0A0B4J1F6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BC053393A0A0B4J1F6 Mipep-204ENSMUST00000225043 1548 ntBASIC20.19■□□□□ 0.82
BC053393A0A0B4J1F6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BC053393A0A0B4J1F6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BC053393A0A0B4J1F6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BC053393A0A0B4J1F6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
BC053393A0A0B4J1F6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BC053393A0A0B4J1F6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BC053393A0A0B4J1F6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BC053393A0A0B4J1F6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BC053393A0A0B4J1F6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
BC053393A0A0B4J1F6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
BC053393A0A0B4J1F6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BC053393A0A0B4J1F6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BC053393A0A0B4J1F6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BC053393A0A0B4J1F6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.12■□□□□ 0.81
BC053393A0A0B4J1F6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BC053393A0A0B4J1F6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
BC053393A0A0B4J1F6 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.11■□□□□ 0.81
BC053393A0A0B4J1F6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms