Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BC053393A0A0B4J1F6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
BC053393A0A0B4J1F6 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.71■□□□□ 0.91
BC053393A0A0B4J1F6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BC053393A0A0B4J1F6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
BC053393A0A0B4J1F6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BC053393A0A0B4J1F6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BC053393A0A0B4J1F6 Gm25262-201ENSMUST00000174934 133 ntBASIC20.68■□□□□ 0.9
BC053393A0A0B4J1F6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BC053393A0A0B4J1F6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
BC053393A0A0B4J1F6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BC053393A0A0B4J1F6 Zxda-201ENSMUST00000117281 2621 ntBASIC20.68■□□□□ 0.9
BC053393A0A0B4J1F6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BC053393A0A0B4J1F6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BC053393A0A0B4J1F6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BC053393A0A0B4J1F6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.65■□□□□ 0.9
BC053393A0A0B4J1F6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BC053393A0A0B4J1F6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BC053393A0A0B4J1F6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.62■□□□□ 0.89
BC053393A0A0B4J1F6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BC053393A0A0B4J1F6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BC053393A0A0B4J1F6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BC053393A0A0B4J1F6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BC053393A0A0B4J1F6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BC053393A0A0B4J1F6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BC053393A0A0B4J1F6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BC053393A0A0B4J1F6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BC053393A0A0B4J1F6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
BC053393A0A0B4J1F6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BC053393A0A0B4J1F6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BC053393A0A0B4J1F6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BC053393A0A0B4J1F6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.52■□□□□ 0.88
BC053393A0A0B4J1F6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BC053393A0A0B4J1F6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BC053393A0A0B4J1F6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BC053393A0A0B4J1F6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BC053393A0A0B4J1F6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BC053393A0A0B4J1F6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.46■□□□□ 0.87
BC053393A0A0B4J1F6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
BC053393A0A0B4J1F6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BC053393A0A0B4J1F6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BC053393A0A0B4J1F6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BC053393A0A0B4J1F6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
BC053393A0A0B4J1F6 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.42■□□□□ 0.86
BC053393A0A0B4J1F6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BC053393A0A0B4J1F6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BC053393A0A0B4J1F6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BC053393A0A0B4J1F6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BC053393A0A0B4J1F6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BC053393A0A0B4J1F6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BC053393A0A0B4J1F6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BC053393A0A0B4J1F6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
BC053393A0A0B4J1F6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BC053393A0A0B4J1F6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BC053393A0A0B4J1F6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
BC053393A0A0B4J1F6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
BC053393A0A0B4J1F6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BC053393A0A0B4J1F6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BC053393A0A0B4J1F6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BC053393A0A0B4J1F6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
BC053393A0A0B4J1F6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
BC053393A0A0B4J1F6 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.34■□□□□ 0.85
BC053393A0A0B4J1F6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BC053393A0A0B4J1F6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
BC053393A0A0B4J1F6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
BC053393A0A0B4J1F6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
BC053393A0A0B4J1F6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
BC053393A0A0B4J1F6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.28■□□□□ 0.84
BC053393A0A0B4J1F6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BC053393A0A0B4J1F6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BC053393A0A0B4J1F6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BC053393A0A0B4J1F6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BC053393A0A0B4J1F6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BC053393A0A0B4J1F6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BC053393A0A0B4J1F6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BC053393A0A0B4J1F6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BC053393A0A0B4J1F6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BC053393A0A0B4J1F6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BC053393A0A0B4J1F6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.21■□□□□ 0.83
BC053393A0A0B4J1F6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.21■□□□□ 0.83
BC053393A0A0B4J1F6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BC053393A0A0B4J1F6 Mipep-204ENSMUST00000225043 1548 ntBASIC20.19■□□□□ 0.82
BC053393A0A0B4J1F6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BC053393A0A0B4J1F6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BC053393A0A0B4J1F6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BC053393A0A0B4J1F6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
BC053393A0A0B4J1F6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BC053393A0A0B4J1F6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BC053393A0A0B4J1F6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BC053393A0A0B4J1F6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BC053393A0A0B4J1F6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
BC053393A0A0B4J1F6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
BC053393A0A0B4J1F6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BC053393A0A0B4J1F6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BC053393A0A0B4J1F6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BC053393A0A0B4J1F6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.12■□□□□ 0.81
BC053393A0A0B4J1F6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BC053393A0A0B4J1F6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
BC053393A0A0B4J1F6 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.11■□□□□ 0.81
BC053393A0A0B4J1F6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms