Protein–RNA interactions for Protein: A0A0A6YYE5

Igkv4-78, Immunoglobulin kappa variable 4-78 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-78A0A0A6YYE5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18,27■□□□□ 0,52
Igkv4-78A0A0A6YYE5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18,26■□□□□ 0,51
Igkv4-78A0A0A6YYE5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18,25■□□□□ 0,51
Igkv4-78A0A0A6YYE5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18,25■□□□□ 0,51
Igkv4-78A0A0A6YYE5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18,23■□□□□ 0,51
Igkv4-78A0A0A6YYE5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18,23■□□□□ 0,51
Igkv4-78A0A0A6YYE5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18,23■□□□□ 0,51
Igkv4-78A0A0A6YYE5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18,23■□□□□ 0,51
Igkv4-78A0A0A6YYE5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18,23■□□□□ 0,51
Igkv4-78A0A0A6YYE5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18,22■□□□□ 0,51
Igkv4-78A0A0A6YYE5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18,22■□□□□ 0,51
Igkv4-78A0A0A6YYE5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18,22■□□□□ 0,51
Igkv4-78A0A0A6YYE5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18,21■□□□□ 0,51
Igkv4-78A0A0A6YYE5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18,21■□□□□ 0,51
Igkv4-78A0A0A6YYE5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18,21■□□□□ 0,51
Igkv4-78A0A0A6YYE5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18,19■□□□□ 0,5
Igkv4-78A0A0A6YYE5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18,19■□□□□ 0,5
Igkv4-78A0A0A6YYE5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18,19■□□□□ 0,5
Igkv4-78A0A0A6YYE5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18,18■□□□□ 0,5
Igkv4-78A0A0A6YYE5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18,18■□□□□ 0,5
Igkv4-78A0A0A6YYE5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18,17■□□□□ 0,5
Igkv4-78A0A0A6YYE5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18,17■□□□□ 0,5
Igkv4-78A0A0A6YYE5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18,17■□□□□ 0,5
Igkv4-78A0A0A6YYE5 AL845457.1-201ENSMUST00000197244 68 ntBASIC18,16■□□□□ 0,5
Igkv4-78A0A0A6YYE5 Mipep-204ENSMUST00000225043 1548 ntBASIC18,15■□□□□ 0,5
Igkv4-78A0A0A6YYE5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18,15■□□□□ 0,5
Igkv4-78A0A0A6YYE5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18,14■□□□□ 0,49
Igkv4-78A0A0A6YYE5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18,13■□□□□ 0,49
Igkv4-78A0A0A6YYE5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18,13■□□□□ 0,49
Igkv4-78A0A0A6YYE5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18,13■□□□□ 0,49
Igkv4-78A0A0A6YYE5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18,11■□□□□ 0,49
Igkv4-78A0A0A6YYE5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18,1■□□□□ 0,49
Igkv4-78A0A0A6YYE5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18,09■□□□□ 0,49
Igkv4-78A0A0A6YYE5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18,09■□□□□ 0,49
Igkv4-78A0A0A6YYE5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18,08■□□□□ 0,49
Igkv4-78A0A0A6YYE5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18,08■□□□□ 0,48
Igkv4-78A0A0A6YYE5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18,08■□□□□ 0,48
Igkv4-78A0A0A6YYE5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18,07■□□□□ 0,48
Igkv4-78A0A0A6YYE5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18,06■□□□□ 0,48
Igkv4-78A0A0A6YYE5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18,05■□□□□ 0,48
Igkv4-78A0A0A6YYE5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18,05■□□□□ 0,48
Igkv4-78A0A0A6YYE5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18,05■□□□□ 0,48
Igkv4-78A0A0A6YYE5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18,05■□□□□ 0,48
Igkv4-78A0A0A6YYE5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18,04■□□□□ 0,48
Igkv4-78A0A0A6YYE5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18,02■□□□□ 0,48
Igkv4-78A0A0A6YYE5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18,02■□□□□ 0,47
Igkv4-78A0A0A6YYE5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18,02■□□□□ 0,47
Igkv4-78A0A0A6YYE5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18,02■□□□□ 0,47
Igkv4-78A0A0A6YYE5 Gm9905-201ENSMUST00000065740 1845 ntBASIC18■□□□□ 0,47
Igkv4-78A0A0A6YYE5 Gm6206-201ENSMUST00000133472 2199 ntBASIC18■□□□□ 0,47
Igkv4-78A0A0A6YYE5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0,47
Igkv4-78A0A0A6YYE5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17,99■□□□□ 0,47
Igkv4-78A0A0A6YYE5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17,99■□□□□ 0,47
Igkv4-78A0A0A6YYE5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17,98■□□□□ 0,47
Igkv4-78A0A0A6YYE5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17,98■□□□□ 0,47
Igkv4-78A0A0A6YYE5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17,98■□□□□ 0,47
Igkv4-78A0A0A6YYE5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17,98■□□□□ 0,47
Igkv4-78A0A0A6YYE5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17,98■□□□□ 0,47
Igkv4-78A0A0A6YYE5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17,98■□□□□ 0,47
Igkv4-78A0A0A6YYE5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17,97■□□□□ 0,47
Igkv4-78A0A0A6YYE5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17,96■□□□□ 0,47
Igkv4-78A0A0A6YYE5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17,95■□□□□ 0,46
Igkv4-78A0A0A6YYE5 Zxda-201ENSMUST00000117281 2621 ntBASIC17,95■□□□□ 0,46
Igkv4-78A0A0A6YYE5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17,94■□□□□ 0,46
Igkv4-78A0A0A6YYE5 Gm25262-201ENSMUST00000174934 133 ntBASIC17,92■□□□□ 0,46
Igkv4-78A0A0A6YYE5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17,92■□□□□ 0,46
Igkv4-78A0A0A6YYE5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17,92■□□□□ 0,46
Igkv4-78A0A0A6YYE5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17,9■□□□□ 0,46
Igkv4-78A0A0A6YYE5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17,89■□□□□ 0,45
Igkv4-78A0A0A6YYE5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17,89■□□□□ 0,45
Igkv4-78A0A0A6YYE5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17,88■□□□□ 0,45
Igkv4-78A0A0A6YYE5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17,87■□□□□ 0,45
Igkv4-78A0A0A6YYE5 Gm43445-201ENSMUST00000198564 2091 ntBASIC17,85■□□□□ 0,45
Igkv4-78A0A0A6YYE5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17,85■□□□□ 0,45
Igkv4-78A0A0A6YYE5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17,85■□□□□ 0,45
Igkv4-78A0A0A6YYE5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17,84■□□□□ 0,45
Igkv4-78A0A0A6YYE5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17,82■□□□□ 0,44
Igkv4-78A0A0A6YYE5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17,82■□□□□ 0,44
Igkv4-78A0A0A6YYE5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17,81■□□□□ 0,44
Igkv4-78A0A0A6YYE5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17,81■□□□□ 0,44
Igkv4-78A0A0A6YYE5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17,8■□□□□ 0,44
Igkv4-78A0A0A6YYE5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17,8■□□□□ 0,44
Igkv4-78A0A0A6YYE5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17,8■□□□□ 0,44
Igkv4-78A0A0A6YYE5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17,8■□□□□ 0,44
Igkv4-78A0A0A6YYE5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17,79■□□□□ 0,44
Igkv4-78A0A0A6YYE5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17,79■□□□□ 0,44
Igkv4-78A0A0A6YYE5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17,78■□□□□ 0,44
Igkv4-78A0A0A6YYE5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17,78■□□□□ 0,44
Igkv4-78A0A0A6YYE5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17,78■□□□□ 0,44
Igkv4-78A0A0A6YYE5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17,77■□□□□ 0,44
Igkv4-78A0A0A6YYE5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17,77■□□□□ 0,43
Igkv4-78A0A0A6YYE5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17,77■□□□□ 0,43
Igkv4-78A0A0A6YYE5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17,76■□□□□ 0,43
Igkv4-78A0A0A6YYE5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17,75■□□□□ 0,43
Igkv4-78A0A0A6YYE5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17,75■□□□□ 0,43
Igkv4-78A0A0A6YYE5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17,75■□□□□ 0,43
Igkv4-78A0A0A6YYE5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17,74■□□□□ 0,43
Igkv4-78A0A0A6YYE5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17,74■□□□□ 0,43
Igkv4-78A0A0A6YYE5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17,73■□□□□ 0,43
Igkv4-78A0A0A6YYE5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17,73■□□□□ 0,43
Retrieved 100 of 76,532 protein–RNA pairs in 12,8 ms