Protein–RNA interactions for Protein: A0A087WQ54

Gm28285, Predicted gene 28285 (Fragment), mousemouse

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28285A0A087WQ54 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.25■□□□□ 0.99
Gm28285A0A087WQ54 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm28285A0A087WQ54 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Gm28285A0A087WQ54 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm28285A0A087WQ54 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm28285A0A087WQ54 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.22■□□□□ 0.99
Gm28285A0A087WQ54 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm28285A0A087WQ54 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Gm28285A0A087WQ54 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28285A0A087WQ54 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28285A0A087WQ54 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.21■□□□□ 0.99
Gm28285A0A087WQ54 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28285A0A087WQ54 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28285A0A087WQ54 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28285A0A087WQ54 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28285A0A087WQ54 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm28285A0A087WQ54 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm28285A0A087WQ54 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Gm28285A0A087WQ54 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm28285A0A087WQ54 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm28285A0A087WQ54 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm28285A0A087WQ54 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm28285A0A087WQ54 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm28285A0A087WQ54 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Gm28285A0A087WQ54 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
Gm28285A0A087WQ54 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28285A0A087WQ54 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28285A0A087WQ54 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28285A0A087WQ54 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
Gm28285A0A087WQ54 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm28285A0A087WQ54 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm28285A0A087WQ54 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm28285A0A087WQ54 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm28285A0A087WQ54 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Gm28285A0A087WQ54 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Gm28285A0A087WQ54 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm28285A0A087WQ54 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.04■□□□□ 0.96
Gm28285A0A087WQ54 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm28285A0A087WQ54 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm28285A0A087WQ54 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28285A0A087WQ54 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28285A0A087WQ54 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gm28285A0A087WQ54 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Gm28285A0A087WQ54 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28285A0A087WQ54 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28285A0A087WQ54 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28285A0A087WQ54 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gm28285A0A087WQ54 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Gm28285A0A087WQ54 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.93■□□□□ 0.94
Gm28285A0A087WQ54 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28285A0A087WQ54 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.92■□□□□ 0.94
Gm28285A0A087WQ54 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm28285A0A087WQ54 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm28285A0A087WQ54 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm28285A0A087WQ54 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.9■□□□□ 0.94
Gm28285A0A087WQ54 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28285A0A087WQ54 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm28285A0A087WQ54 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Gm28285A0A087WQ54 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Gm28285A0A087WQ54 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28285A0A087WQ54 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28285A0A087WQ54 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gm28285A0A087WQ54 Amer2-203ENSMUST00000225247 2662 ntBASIC20.84■□□□□ 0.93
Gm28285A0A087WQ54 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Gm28285A0A087WQ54 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28285A0A087WQ54 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm28285A0A087WQ54 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.82■□□□□ 0.92
Gm28285A0A087WQ54 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm28285A0A087WQ54 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gm28285A0A087WQ54 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Gm28285A0A087WQ54 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm28285A0A087WQ54 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm28285A0A087WQ54 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.79■□□□□ 0.92
Gm28285A0A087WQ54 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28285A0A087WQ54 Mipep-204ENSMUST00000225043 1548 ntBASIC20.77■□□□□ 0.92
Gm28285A0A087WQ54 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm28285A0A087WQ54 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm28285A0A087WQ54 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.76■□□□□ 0.91
Gm28285A0A087WQ54 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.76■□□□□ 0.91
Gm28285A0A087WQ54 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.76■□□□□ 0.91
Gm28285A0A087WQ54 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.75■□□□□ 0.91
Gm28285A0A087WQ54 Gm25238-201ENSMUST00000174914 89 ntBASIC20.74■□□□□ 0.91
Gm28285A0A087WQ54 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.72■□□□□ 0.91
Gm28285A0A087WQ54 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28285A0A087WQ54 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28285A0A087WQ54 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Gm28285A0A087WQ54 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28285A0A087WQ54 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Gm28285A0A087WQ54 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28285A0A087WQ54 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28285A0A087WQ54 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.69■□□□□ 0.9
Gm28285A0A087WQ54 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28285A0A087WQ54 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.68■□□□□ 0.9
Gm28285A0A087WQ54 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28285A0A087WQ54 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28285A0A087WQ54 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Gm28285A0A087WQ54 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Gm28285A0A087WQ54 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Gm28285A0A087WQ54 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28285A0A087WQ54 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms