Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 Z98259.1-201ENST00000564261 1697 ntBASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 MIR193A-201ENST00000384882 88 ntBASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 AC074019.1-201ENST00000428788 1096 ntBASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 AC116347.1-201ENST00000442824 720 ntBASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 OR2A1-AS1-203ENST00000468575 568 ntBASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 AC063924.1-201ENST00000546680 673 ntBASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC17.26■□□□□ 0.35
SHANK3Q9BYB0 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 AC007191.1-201ENST00000623179 2995 ntBASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 AC009779.7-201ENST00000609031 469 ntBASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 MIR6819-201ENST00000622122 61 ntBASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 CYP2B7P-201ENST00000541697 1476 ntBASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 USP8-219ENST00000625664 1568 ntTSL 5 BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHANK3Q9BYB0 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 AC023794.5-201ENST00000564380 2157 ntBASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 AC012100.1-201ENST00000470304 282 ntBASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 RN7SL678P-201ENST00000579533 299 ntBASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 AC136475.9-201ENST00000605240 497 ntBASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 AACSP1-202ENST00000521412 1095 ntBASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHANK3Q9BYB0 AC005549.1-201ENST00000579438 1629 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms