Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 KRT8P38-201ENST00000441370 1430 ntBASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 AC245140.2-201ENST00000624054 1939 ntBASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 AC040160.2-201ENST00000623816 1675 ntBASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 AL008638.4-201ENST00000624792 1315 ntBASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 AHCYP3-201ENST00000420053 1279 ntBASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 HLA-W-207ENST00000439514 771 ntBASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 GYG1-209ENST00000483267 801 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 RPL29P2-202ENST00000498671 657 ntBASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 NDUFB2P1-201ENST00000506966 295 ntBASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 PHBP18-201ENST00000546648 813 ntBASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 METTL7AP1-201ENST00000547343 496 ntBASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 MIR5091-201ENST00000578707 93 ntBASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 RN7SL134P-201ENST00000579756 303 ntBASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 LINC02486-201ENST00000604157 3000 ntBASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 HSPA7-201ENST00000445535 1927 ntBASIC13.51□□□□□ -0.25
LYSMD4Q5XG99 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.5□□□□□ -0.25
LYSMD4Q5XG99 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD4Q5XG99 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD4Q5XG99 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC13.5□□□□□ -0.25
LYSMD4Q5XG99 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LYSMD4Q5XG99 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
LYSMD4Q5XG99 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD4Q5XG99 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD4Q5XG99 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD4Q5XG99 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.5□□□□□ -0.25
LYSMD4Q5XG99 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD4Q5XG99 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD4Q5XG99 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms