Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HTTP42858 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HTTP42858 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.97□□□□□ -0.01
HTTP42858 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HTTP42858 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HTTP42858 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HTTP42858 MIR602-201ENST00000384960 98 ntBASIC14.97□□□□□ -0.01
HTTP42858 AL356653.1-201ENST00000402743 360 ntBASIC14.97□□□□□ -0.01
HTTP42858 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC14.97□□□□□ -0.01
HTTP42858 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HTTP42858 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC14.97□□□□□ -0.01
HTTP42858 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC14.97□□□□□ -0.01
HTTP42858 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.97□□□□□ -0.01
HTTP42858 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HTTP42858 AC245884.8-201ENST00000599382 880 ntBASIC14.97□□□□□ -0.01
HTTP42858 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HTTP42858 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HTTP42858 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HTTP42858 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.97□□□□□ -0.01
HTTP42858 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HTTP42858 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HTTP42858 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HTTP42858 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HTTP42858 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HTTP42858 MUTYH-236ENST00000529984 1029 ntTSL 2 BASIC14.97□□□□□ -0.01
HTTP42858 AL606834.1-201ENST00000553836 1169 ntBASIC14.97□□□□□ -0.01
HTTP42858 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HTTP42858 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HTTP42858 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
HTTP42858 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.97□□□□□ -0.01
HTTP42858 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HTTP42858 AL590824.1-201ENST00000403828 1349 ntBASIC14.97□□□□□ -0.01
HTTP42858 AC023824.1-201ENST00000562945 2975 ntBASIC14.97□□□□□ -0.01
HTTP42858 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HTTP42858 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC14.97□□□□□ -0.01
HTTP42858 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HTTP42858 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC14.97□□□□□ -0.01
HTTP42858 AC090950.1-202ENST00000605733 644 ntBASIC14.97□□□□□ -0.01
HTTP42858 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HTTP42858 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HTTP42858 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HTTP42858 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.96□□□□□ -0.01
HTTP42858 DDC-212ENST00000615193 1674 ntTSL 3 BASIC14.96□□□□□ -0.01
HTTP42858 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HTTP42858 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HTTP42858 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
HTTP42858 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HTTP42858 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HTTP42858 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HTTP42858 AC007312.1-201ENST00000427493 258 ntBASIC14.96□□□□□ -0.01
HTTP42858 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC14.96□□□□□ -0.01
HTTP42858 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC14.96□□□□□ -0.01
HTTP42858 snoZ6.3-201ENST00000583496 76 ntBASIC14.96□□□□□ -0.01
HTTP42858 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HTTP42858 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.96□□□□□ -0.01
HTTP42858 AC104640.1-201ENST00000562617 2109 ntBASIC14.96□□□□□ -0.01
HTTP42858 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.96□□□□□ -0.01
HTTP42858 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
HTTP42858 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.96□□□□□ -0.01
HTTP42858 AHCYP7-201ENST00000560847 1308 ntBASIC14.96□□□□□ -0.01
HTTP42858 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HTTP42858 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HTTP42858 HNRNPA1P30-202ENST00000440699 997 ntBASIC14.96□□□□□ -0.02
HTTP42858 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC14.96□□□□□ -0.02
HTTP42858 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
HTTP42858 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HTTP42858 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
HTTP42858 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
HTTP42858 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.96□□□□□ -0.02
HTTP42858 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HTTP42858 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HTTP42858 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.96□□□□□ -0.02
HTTP42858 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
HTTP42858 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HTTP42858 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
HTTP42858 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HTTP42858 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HTTP42858 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HTTP42858 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HTTP42858 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HTTP42858 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
HTTP42858 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC14.95□□□□□ -0.02
HTTP42858 MRPL45P2-201ENST00000425159 927 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HTTP42858 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC14.95□□□□□ -0.02
HTTP42858 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
HTTP42858 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HTTP42858 M1AP-201ENST00000290536 2543 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HTTP42858 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HTTP42858 AC012531.1-201ENST00000562848 2680 ntBASIC14.95□□□□□ -0.02
HTTP42858 Z97653.2-201ENST00000623057 1418 ntBASIC14.95□□□□□ -0.02
HTTP42858 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HTTP42858 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC14.95□□□□□ -0.02
HTTP42858 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.95□□□□□ -0.02
HTTP42858 TUBAP-201ENST00000425085 1352 ntBASIC14.95□□□□□ -0.02
HTTP42858 FAM9A-201ENST00000381003 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HTTP42858 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HTTP42858 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HTTP42858 AC099689.1-201ENST00000624383 1302 ntBASIC14.95□□□□□ -0.02
HTTP42858 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC14.95□□□□□ -0.02
HTTP42858 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms