Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 AC004835.2-201ENST00000603762 682 ntBASIC12.51□□□□□ -0.41
APOA1P02647 CR392039.2-201ENST00000623182 509 ntBASIC12.51□□□□□ -0.41
APOA1P02647 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
APOA1P02647 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC12.51□□□□□ -0.41
APOA1P02647 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 AL583810.2-201ENST00000556430 3254 ntBASIC12.51□□□□□ -0.41
APOA1P02647 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC12.51□□□□□ -0.41
APOA1P02647 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC12.51□□□□□ -0.41
APOA1P02647 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.51□□□□□ -0.41
APOA1P02647 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
APOA1P02647 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 AC108024.1-201ENST00000626286 1721 ntBASIC12.51□□□□□ -0.41
APOA1P02647 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
APOA1P02647 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
APOA1P02647 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.5□□□□□ -0.41
APOA1P02647 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC12.5□□□□□ -0.41
APOA1P02647 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC12.5□□□□□ -0.41
APOA1P02647 UBTFL8-201ENST00000426903 2112 ntBASIC12.5□□□□□ -0.41
APOA1P02647 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC12.5□□□□□ -0.41
APOA1P02647 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.5□□□□□ -0.41
APOA1P02647 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
APOA1P02647 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC12.5□□□□□ -0.41
APOA1P02647 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.5□□□□□ -0.41
APOA1P02647 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.5□□□□□ -0.41
APOA1P02647 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.5□□□□□ -0.41
APOA1P02647 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC12.5□□□□□ -0.41
APOA1P02647 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.5□□□□□ -0.41
APOA1P02647 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
APOA1P02647 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.5□□□□□ -0.41
APOA1P02647 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.5□□□□□ -0.41
APOA1P02647 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.5□□□□□ -0.41
APOA1P02647 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.5□□□□□ -0.41
APOA1P02647 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.5□□□□□ -0.41
APOA1P02647 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.5□□□□□ -0.41
APOA1P02647 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
APOA1P02647 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.5□□□□□ -0.41
APOA1P02647 AL662799.1-202ENST00000614205 422 ntBASIC12.5□□□□□ -0.41
APOA1P02647 BX640515.1-201ENST00000617215 977 ntBASIC12.5□□□□□ -0.41
APOA1P02647 AC087499.5-201ENST00000452760 1342 ntBASIC12.5□□□□□ -0.41
APOA1P02647 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.5□□□□□ -0.41
APOA1P02647 USB1-207ENST00000563149 1751 ntTSL 2 BASIC12.5□□□□□ -0.41
APOA1P02647 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
APOA1P02647 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.5□□□□□ -0.41
APOA1P02647 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
APOA1P02647 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
APOA1P02647 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 PIGM-201ENST00000368090 4319 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
APOA1P02647 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
APOA1P02647 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOA1P02647 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
APOA1P02647 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
APOA1P02647 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC12.49□□□□□ -0.41
APOA1P02647 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.49□□□□□ -0.41
APOA1P02647 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 AL031432.4-201ENST00000641729 2190 ntBASIC12.49□□□□□ -0.41
APOA1P02647 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.49□□□□□ -0.41
APOA1P02647 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
APOA1P02647 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 GUCY2EP-203ENST00000531117 1918 ntBASIC12.49□□□□□ -0.41
APOA1P02647 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.49□□□□□ -0.41
APOA1P02647 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.49□□□□□ -0.41
APOA1P02647 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.49□□□□□ -0.41
APOA1P02647 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
APOA1P02647 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.49□□□□□ -0.41
APOA1P02647 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOA1P02647 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms