Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-CQ95604 RPL10P8-201ENST00000522888 313 ntBASIC14.22□□□□□ -0.13
HLA-CQ95604 RPL30-213ENST00000523172 274 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-CQ95604 HAX1-211ENST00000532105 771 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-CQ95604 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-CQ95604 IGHV1OR16-3-201ENST00000568138 205 ntBASIC14.22□□□□□ -0.13
HLA-CQ95604 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-CQ95604 AL078624.1-201ENST00000604004 547 ntBASIC14.22□□□□□ -0.13
HLA-CQ95604 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 AC006273.1-201ENST00000606966 861 ntBASIC14.22□□□□□ -0.13
HLA-CQ95604 MDC1-209ENST00000613547 830 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-CQ95604 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HLA-CQ95604 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HLA-CQ95604 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-CQ95604 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
HLA-CQ95604 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-CQ95604 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-CQ95604 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
HLA-CQ95604 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-CQ95604 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HLA-CQ95604 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
HLA-CQ95604 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-CQ95604 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HLA-CQ95604 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-CQ95604 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-CQ95604 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HLA-CQ95604 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-CQ95604 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC14.21□□□□□ -0.13
HLA-CQ95604 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.21□□□□□ -0.13
HLA-CQ95604 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HLA-CQ95604 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HLA-CQ95604 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-CQ95604 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-CQ95604 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HLA-CQ95604 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-CQ95604 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HLA-CQ95604 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HLA-CQ95604 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-CQ95604 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-CQ95604 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-CQ95604 Z84721.1-201ENST00000438841 372 ntBASIC14.21□□□□□ -0.13
HLA-CQ95604 RSL24D1P2-201ENST00000445584 366 ntBASIC14.21□□□□□ -0.13
HLA-CQ95604 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-CQ95604 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-CQ95604 AC114812.4-201ENST00000506676 757 ntBASIC14.21□□□□□ -0.13
HLA-CQ95604 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC14.21□□□□□ -0.13
HLA-CQ95604 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-CQ95604 FOS-205ENST00000555242 629 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-CQ95604 MTATP6P25-201ENST00000574491 261 ntBASIC14.21□□□□□ -0.13
HLA-CQ95604 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC14.21□□□□□ -0.13
HLA-CQ95604 HNRNPA1P11-201ENST00000580106 956 ntBASIC14.21□□□□□ -0.13
HLA-CQ95604 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-CQ95604 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-CQ95604 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC14.21□□□□□ -0.13
HLA-CQ95604 AC010335.3-201ENST00000623767 531 ntBASIC14.21□□□□□ -0.13
HLA-CQ95604 MIEF1-215ENST00000637854 213 ntBASIC14.21□□□□□ -0.13
HLA-CQ95604 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HLA-CQ95604 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-CQ95604 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-CQ95604 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-CQ95604 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-CQ95604 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-CQ95604 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-CQ95604 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-CQ95604 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HLA-CQ95604 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-CQ95604 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
HLA-CQ95604 AC245140.2-201ENST00000624054 1939 ntBASIC14.21□□□□□ -0.14
HLA-CQ95604 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.21□□□□□ -0.14
HLA-CQ95604 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
HLA-CQ95604 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC14.21□□□□□ -0.14
HLA-CQ95604 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.21□□□□□ -0.14
HLA-CQ95604 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
HLA-CQ95604 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
HLA-CQ95604 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-CQ95604 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-CQ95604 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.21□□□□□ -0.14
HLA-CQ95604 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-CQ95604 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
HLA-CQ95604 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-CQ95604 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-CQ95604 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-CQ95604 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
HLA-CQ95604 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
HLA-CQ95604 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-CQ95604 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms