Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC009238.3-201ENST00000512705 217 ntBASIC13.28□□□□□ -0.28
RIF1Q5UIP0 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 AC069366.2-201ENST00000583643 430 ntBASIC13.28□□□□□ -0.28
RIF1Q5UIP0 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 AC104212.2-201ENST00000478813 628 ntBASIC13.28□□□□□ -0.28
RIF1Q5UIP0 LDHAL6CP-201ENST00000502352 1142 ntBASIC13.28□□□□□ -0.28
RIF1Q5UIP0 HINT1-208ENST00000513012 583 ntTSL 4 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 AC007992.1-201ENST00000513953 953 ntBASIC13.28□□□□□ -0.28
RIF1Q5UIP0 AC104759.1-201ENST00000559109 939 ntBASIC13.28□□□□□ -0.28
RIF1Q5UIP0 AC103810.4-201ENST00000578601 257 ntBASIC13.28□□□□□ -0.28
RIF1Q5UIP0 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RIF1Q5UIP0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.27□□□□□ -0.28
RIF1Q5UIP0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.27□□□□□ -0.28
RIF1Q5UIP0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.27□□□□□ -0.28
RIF1Q5UIP0 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC13.27□□□□□ -0.28
RIF1Q5UIP0 TSPY26P-202ENST00000565928 3884 ntBASIC13.27□□□□□ -0.28
RIF1Q5UIP0 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC13.27□□□□□ -0.28
RIF1Q5UIP0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RIF1Q5UIP0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RIF1Q5UIP0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RIF1Q5UIP0 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC13.27□□□□□ -0.28
RIF1Q5UIP0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.27□□□□□ -0.28
RIF1Q5UIP0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
RIF1Q5UIP0 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 TFAM-201ENST00000373895 973 ntTSL 2 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 AC105443.1-201ENST00000433754 712 ntBASIC13.27□□□□□ -0.29
RIF1Q5UIP0 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 AC131097.4-201ENST00000442867 571 ntTSL 4 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 RN7SL111P-201ENST00000468841 285 ntBASIC13.27□□□□□ -0.29
RIF1Q5UIP0 OARD1-214ENST00000486443 764 ntTSL 3 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 RPL29P2-202ENST00000498671 657 ntBASIC13.27□□□□□ -0.29
RIF1Q5UIP0 AC138781.1-201ENST00000501322 505 ntTSL 3 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 MTND6P4-201ENST00000506002 522 ntBASIC13.27□□□□□ -0.29
RIF1Q5UIP0 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 SNORA50D-202ENST00000627561 132 ntBASIC13.27□□□□□ -0.29
RIF1Q5UIP0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 CD9-212ENST00000610354 1315 ntTSL 5 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 INTS4P1-203ENST00000641008 3683 ntBASIC13.27□□□□□ -0.29
RIF1Q5UIP0 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 RNA5SP407-201ENST00000410275 110 ntBASIC13.27□□□□□ -0.29
RIF1Q5UIP0 NME6-211ENST00000447314 621 ntTSL 3 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 PLA2G6-213ENST00000447598 567 ntTSL 5 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 SNORA74.2-201ENST00000516496 180 ntBASIC13.27□□□□□ -0.29
RIF1Q5UIP0 AC063924.1-201ENST00000546680 673 ntBASIC13.27□□□□□ -0.29
RIF1Q5UIP0 MT1G-204ENST00000569500 305 ntTSL 3 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 AC090950.1-202ENST00000605733 644 ntBASIC13.27□□□□□ -0.29
RIF1Q5UIP0 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RIF1Q5UIP0 MIR6741-201ENST00000618782 63 ntBASIC13.27□□□□□ -0.29
RIF1Q5UIP0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms