Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC10.98□□□□□ -0.65
CD28P10747 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC10.98□□□□□ -0.65
CD28P10747 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC10.98□□□□□ -0.65
CD28P10747 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC10.98□□□□□ -0.65
CD28P10747 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CD28P10747 RN7SL788P-201ENST00000460504 316 ntBASIC10.98□□□□□ -0.65
CD28P10747 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
CD28P10747 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CD28P10747 SLC25A15P3-201ENST00000505530 290 ntBASIC10.98□□□□□ -0.65
CD28P10747 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC10.98□□□□□ -0.65
CD28P10747 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
CD28P10747 NAA40-205ENST00000539656 577 ntTSL 4 BASIC10.98□□□□□ -0.65
CD28P10747 AC226150.1-201ENST00000544259 466 ntBASIC10.98□□□□□ -0.65
CD28P10747 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC10.98□□□□□ -0.65
CD28P10747 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC10.98□□□□□ -0.65
CD28P10747 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC10.98□□□□□ -0.65
CD28P10747 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CD28P10747 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC10.98□□□□□ -0.65
CD28P10747 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CD28P10747 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC10.98□□□□□ -0.65
CD28P10747 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
CD28P10747 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CD28P10747 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CD28P10747 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
CD28P10747 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CD28P10747 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CD28P10747 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CD28P10747 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CD28P10747 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CD28P10747 AC021305.1-201ENST00000520656 1514 ntBASIC10.98□□□□□ -0.65
CD28P10747 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC10.98□□□□□ -0.65
CD28P10747 TP73-211ENST00000604074 4806 ntTSL 5 BASIC10.98□□□□□ -0.65
CD28P10747 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CD28P10747 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CD28P10747 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC10.98□□□□□ -0.65
CD28P10747 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
CD28P10747 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC10.98□□□□□ -0.65
CD28P10747 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CD28P10747 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CD28P10747 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC10.98□□□□□ -0.65
CD28P10747 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
CD28P10747 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC10.97□□□□□ -0.65
CD28P10747 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC10.97□□□□□ -0.65
CD28P10747 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC10.97□□□□□ -0.65
CD28P10747 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 WARS-203ENST00000358655 2466 ntTSL 2 BASIC10.97□□□□□ -0.65
CD28P10747 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC10.97□□□□□ -0.65
CD28P10747 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
CD28P10747 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
CD28P10747 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
CD28P10747 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
CD28P10747 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC10.97□□□□□ -0.65
CD28P10747 STK16-203ENST00000409516 895 ntTSL 2 BASIC10.97□□□□□ -0.65
CD28P10747 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC10.97□□□□□ -0.65
CD28P10747 PPP1R2P4-201ENST00000424051 595 ntBASIC10.97□□□□□ -0.65
CD28P10747 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
CD28P10747 RN7SL375P-201ENST00000492442 298 ntBASIC10.97□□□□□ -0.65
CD28P10747 RN7SL767P-201ENST00000493013 295 ntBASIC10.97□□□□□ -0.65
CD28P10747 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC10.97□□□□□ -0.65
CD28P10747 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC10.97□□□□□ -0.65
CD28P10747 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC10.97□□□□□ -0.65
CD28P10747 MIR4472-1-201ENST00000584349 80 ntBASIC10.97□□□□□ -0.65
CD28P10747 AP005264.5-201ENST00000590066 467 ntBASIC10.97□□□□□ -0.65
CD28P10747 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC10.97□□□□□ -0.65
CD28P10747 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC10.97□□□□□ -0.65
CD28P10747 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC10.97□□□□□ -0.65
CD28P10747 AC007952.5-201ENST00000572818 1486 ntBASIC10.97□□□□□ -0.65
CD28P10747 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC10.97□□□□□ -0.65
CD28P10747 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC10.97□□□□□ -0.65
CD28P10747 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
CD28P10747 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC10.97□□□□□ -0.65
CD28P10747 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC10.97□□□□□ -0.65
CD28P10747 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC10.97□□□□□ -0.65
CD28P10747 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CD28P10747 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
CD28P10747 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
CD28P10747 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CD28P10747 LINC01230-201ENST00000625222 3017 ntBASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms