Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
UPF2Q9HAU5 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
UPF2Q9HAU5 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 SHMT1P1-201ENST00000419974 1312 ntBASIC17.26■□□□□ 0.35
UPF2Q9HAU5 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 KRT8P4-201ENST00000509735 1454 ntBASIC17.26■□□□□ 0.35
UPF2Q9HAU5 AC104758.3-203ENST00000562938 2123 ntBASIC17.26■□□□□ 0.35
UPF2Q9HAU5 EML1-203ENST00000334192 4064 ntTSL 5 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 AL355994.2-201ENST00000447882 704 ntBASIC17.26■□□□□ 0.35
UPF2Q9HAU5 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 GNRHR2-203ENST00000581100 1187 ntBASIC17.26■□□□□ 0.35
UPF2Q9HAU5 AC010319.3-201ENST00000597028 470 ntBASIC17.26■□□□□ 0.35
UPF2Q9HAU5 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC17.26■□□□□ 0.35
UPF2Q9HAU5 MIR6720-201ENST00000611664 98 ntBASIC17.26■□□□□ 0.35
UPF2Q9HAU5 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 MARK2P16-201ENST00000605714 1723 ntBASIC17.26■□□□□ 0.35
UPF2Q9HAU5 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 AMT-221ENST00000538581 2038 ntTSL 2 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 OS9-203ENST00000389142 2457 ntTSL 5 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPF2Q9HAU5 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.25■□□□□ 0.35
UPF2Q9HAU5 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 AL645933.1-201ENST00000440087 609 ntBASIC17.25■□□□□ 0.35
UPF2Q9HAU5 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 AP001889.1-201ENST00000525414 633 ntBASIC17.25■□□□□ 0.35
UPF2Q9HAU5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 AC132192.2-201ENST00000596206 1147 ntBASIC17.25■□□□□ 0.35
UPF2Q9HAU5 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.25■□□□□ 0.35
UPF2Q9HAU5 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.25■□□□□ 0.35
UPF2Q9HAU5 AC006453.4-201ENST00000636949 1252 ntBASIC17.25■□□□□ 0.35
UPF2Q9HAU5 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 PI4KAP2-201ENST00000360806 2080 ntBASIC17.25■□□□□ 0.35
UPF2Q9HAU5 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF2Q9HAU5 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms