Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 AL512384.1-201ENST00000406683 331 ntBASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 AC100827.2-201ENST00000563214 1194 ntBASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 AC009884.2-201ENST00000603110 324 ntBASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 AC133540.1-201ENST00000620845 1019 ntBASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 IGHV3-72-202ENST00000621503 303 ntBASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 RHOXF1P1-202ENST00000635473 501 ntBASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
BBS1Q8NFJ9 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.65□□□□□ -0.39
BBS1Q8NFJ9 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
BBS1Q8NFJ9 AC002350.2-201ENST00000623894 1828 ntBASIC12.65□□□□□ -0.39
BBS1Q8NFJ9 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 KRT17P7-201ENST00000451704 1104 ntBASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 AL355385.1-201ENST00000606123 409 ntBASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 AL162426.1-201ENST00000624141 743 ntBASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 VENTXP1-201ENST00000569334 2716 ntBASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 AL139158.3-201ENST00000641212 1562 ntBASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BBS1Q8NFJ9 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BBS1Q8NFJ9 Z98257.2-202ENST00000641138 1548 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms