Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 AC020928.1-201ENST00000590750 1850 ntTSL 2 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 TUBB8P4-201ENST00000511806 1324 ntBASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 ZNRD1-202ENST00000359374 743 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 SPANXD-201ENST00000370515 682 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 DMKN-202ENST00000392206 458 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 AL357054.1-201ENST00000407035 1227 ntBASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 ALDH7A1-203ENST00000413020 1126 ntTSL 2 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 ZFR2-203ENST00000439086 870 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 AC073089.1-201ENST00000457546 214 ntBASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 RN7SL771P-201ENST00000482328 298 ntBASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 AC091965.1-201ENST00000512406 440 ntTSL 3 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 SAP30L-AS1-202ENST00000519727 396 ntTSL 3 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 OR13C2-201ENST00000542196 957 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 MIR3689A-201ENST00000578854 78 ntBASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 AC090376.1-202ENST00000587276 470 ntTSL 3 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 Metazoa_SRP.198-201ENST00000610617 323 ntBASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 PCGF2-205ENST00000618506 1196 ntTSL 5 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 TNNT3-217ENST00000641225 877 ntBASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIMBP3Q9UFD9 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 MPI-208ENST00000563786 1707 ntTSL 5 BASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 PRORSD1P-202ENST00000563365 2154 ntBASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 AC124254.1-201ENST00000583629 562 ntTSL 4 BASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 TSPAN16-204ENST00000590327 997 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIMBP3Q9UFD9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 FAM173B-207ENST00000511437 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 PLP2-201ENST00000376322 620 ntTSL 2 BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 PAX5-209ENST00000520154 1255 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 TPD52L1-206ENST00000524679 915 ntTSL 2 BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 AC080023.2-201ENST00000532615 208 ntBASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 SMIM22-204ENST00000588606 394 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 AC079882.1-201ENST00000609433 375 ntBASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 IL1RAP-210ENST00000434491 1565 ntTSL 5 BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 M1AP-201ENST00000290536 2543 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
RIMBP3Q9UFD9 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 AL355357.1-203ENST00000402154 639 ntBASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 MT1XP1-201ENST00000421314 186 ntBASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 AP001630.1-201ENST00000428410 437 ntTSL 2 BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 AC011995.1-201ENST00000437610 578 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 AC007652.1-201ENST00000441150 562 ntTSL 4 BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 FAM86DP-202ENST00000477247 995 ntBASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 POU5F1-205ENST00000512818 1233 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 AC023078.3-201ENST00000527463 958 ntBASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 AC005726.6-201ENST00000579019 1083 ntTSL 3 BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 TTN-AS1-236ENST00000590040 855 ntTSL 5 BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC20.9■□□□□ 0.94
RIMBP3Q9UFD9 THUMPD1P1-201ENST00000400014 1041 ntBASIC20.89■□□□□ 0.94
RIMBP3Q9UFD9 AL031432.1-201ENST00000455902 988 ntTSL 3 BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms