Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 CU639417.3-201ENST00000624240 1404 ntBASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 AL035414.1-201ENST00000451327 857 ntBASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 AC022137.2-201ENST00000503482 481 ntBASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 CR383656.12-201ENST00000549567 513 ntBASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 CECR7-204ENST00000609932 568 ntTSL 2 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ANKRD55Q3KP44 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 ZNF493-208ENST00000599461 1769 ntBASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 NPTN-IT1-201ENST00000628401 2283 ntBASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ANKRD55Q3KP44 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 AC063926.2-201ENST00000623766 1308 ntBASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 HMGA1P1-201ENST00000415560 1062 ntBASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 RN7SL752P-201ENST00000463779 287 ntBASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 RN7SL692P-201ENST00000464677 288 ntBASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 CDC23-208ENST00000505120 455 ntTSL 3 BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 AL512310.5-201ENST00000551999 515 ntBASIC11.7□□□□□ -0.54
ANKRD55Q3KP44 AC106820.3-201ENST00000561653 397 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms