Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNRPFP62306 PYY2-201ENST00000315776 282 ntBASIC15.17■□□□□ 0.02
SNRPFP62306 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.17■□□□□ 0.02
SNRPFP62306 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC15.17■□□□□ 0.02
SNRPFP62306 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNRPFP62306 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNRPFP62306 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SNRPFP62306 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SNRPFP62306 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.17■□□□□ 0.02
SNRPFP62306 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.17■□□□□ 0.02
SNRPFP62306 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNRPFP62306 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.17■□□□□ 0.02
SNRPFP62306 CHCHD2P9-201ENST00000461726 456 ntBASIC15.17■□□□□ 0.02
SNRPFP62306 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SNRPFP62306 ORAOV1P1-201ENST00000503108 395 ntBASIC15.17■□□□□ 0.02
SNRPFP62306 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.17■□□□□ 0.02
SNRPFP62306 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.17■□□□□ 0.02
SNRPFP62306 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.17■□□□□ 0.02
SNRPFP62306 AC103810.10-201ENST00000606504 343 ntBASIC15.17■□□□□ 0.02
SNRPFP62306 AC091769.1-201ENST00000619576 568 ntBASIC15.17■□□□□ 0.02
SNRPFP62306 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNRPFP62306 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNRPFP62306 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SNRPFP62306 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNRPFP62306 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNRPFP62306 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNRPFP62306 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SNRPFP62306 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.17■□□□□ 0.02
SNRPFP62306 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.17■□□□□ 0.02
SNRPFP62306 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNRPFP62306 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNRPFP62306 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SNRPFP62306 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SNRPFP62306 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNRPFP62306 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 AL355102.3-201ENST00000554299 1678 ntBASIC15.16■□□□□ 0.02
SNRPFP62306 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SNRPFP62306 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC15.16■□□□□ 0.02
SNRPFP62306 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SNRPFP62306 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.16■□□□□ 0.02
SNRPFP62306 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
SNRPFP62306 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 BCYRN1-201ENST00000418539 200 ntBASIC15.16■□□□□ 0.02
SNRPFP62306 AC136604.1-202ENST00000425471 771 ntBASIC15.16■□□□□ 0.02
SNRPFP62306 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC15.16■□□□□ 0.02
SNRPFP62306 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.16■□□□□ 0.02
SNRPFP62306 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC15.16■□□□□ 0.02
SNRPFP62306 UPF3AP2-201ENST00000457924 1132 ntBASIC15.16■□□□□ 0.02
SNRPFP62306 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC15.16■□□□□ 0.02
SNRPFP62306 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.16■□□□□ 0.02
SNRPFP62306 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.16■□□□□ 0.02
SNRPFP62306 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.16■□□□□ 0.02
SNRPFP62306 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.16■□□□□ 0.02
SNRPFP62306 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.16■□□□□ 0.02
SNRPFP62306 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC15.16■□□□□ 0.02
SNRPFP62306 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC15.16■□□□□ 0.02
SNRPFP62306 AC005632.3-201ENST00000605544 308 ntBASIC15.16■□□□□ 0.02
SNRPFP62306 AC084346.2-201ENST00000607097 949 ntBASIC15.16■□□□□ 0.02
SNRPFP62306 AL031673.1-201ENST00000611460 466 ntBASIC15.16■□□□□ 0.02
SNRPFP62306 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SNRPFP62306 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
SNRPFP62306 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SNRPFP62306 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SNRPFP62306 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
SNRPFP62306 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SNRPFP62306 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNRPFP62306 AGAP12P-201ENST00000585227 2359 ntBASIC15.16■□□□□ 0.02
SNRPFP62306 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
SNRPFP62306 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNRPFP62306 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNRPFP62306 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNRPFP62306 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
SNRPFP62306 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SNRPFP62306 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNRPFP62306 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.15■□□□□ 0.02
SNRPFP62306 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNRPFP62306 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SNRPFP62306 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNRPFP62306 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms