Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
NEDD4P46934 AL353726.2-201ENST00000623259 884 ntBASIC16.43■□□□□ 0.22
NEDD4P46934 GARS-210ENST00000627489 324 ntTSL 4 BASIC16.43■□□□□ 0.22
NEDD4P46934 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.43■□□□□ 0.22
NEDD4P46934 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEDD4P46934 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NEDD4P46934 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC16.42■□□□□ 0.22
NEDD4P46934 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC16.42■□□□□ 0.22
NEDD4P46934 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC16.42■□□□□ 0.22
NEDD4P46934 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 AC020763.3-201ENST00000625095 2904 ntBASIC16.42■□□□□ 0.22
NEDD4P46934 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC16.42■□□□□ 0.22
NEDD4P46934 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NEDD4P46934 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NEDD4P46934 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.42■□□□□ 0.22
NEDD4P46934 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC16.42■□□□□ 0.22
NEDD4P46934 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.42■□□□□ 0.22
NEDD4P46934 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC16.42■□□□□ 0.22
NEDD4P46934 OR52M2P-201ENST00000414298 959 ntBASIC16.42■□□□□ 0.22
NEDD4P46934 HINT2P1-201ENST00000419438 481 ntBASIC16.42■□□□□ 0.22
NEDD4P46934 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC16.42■□□□□ 0.22
NEDD4P46934 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.42■□□□□ 0.22
NEDD4P46934 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.42■□□□□ 0.22
NEDD4P46934 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NEDD4P46934 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
NEDD4P46934 AC130709.1-201ENST00000484779 1212 ntBASIC16.42■□□□□ 0.22
NEDD4P46934 COQ10BP2-201ENST00000513804 724 ntBASIC16.42■□□□□ 0.22
NEDD4P46934 AL132994.1-201ENST00000554098 400 ntBASIC16.42■□□□□ 0.22
NEDD4P46934 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.42■□□□□ 0.22
NEDD4P46934 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 AC018635.2-201ENST00000608625 364 ntBASIC16.42■□□□□ 0.22
NEDD4P46934 Z98885.3-201ENST00000624882 1757 ntBASIC16.42■□□□□ 0.22
NEDD4P46934 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEDD4P46934 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.41■□□□□ 0.22
NEDD4P46934 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC16.41■□□□□ 0.22
NEDD4P46934 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NEDD4P46934 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 RCC2P5-201ENST00000492126 1487 ntBASIC16.41■□□□□ 0.22
NEDD4P46934 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
NEDD4P46934 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.41■□□□□ 0.22
NEDD4P46934 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NEDD4P46934 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NEDD4P46934 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.41■□□□□ 0.22
NEDD4P46934 RNVU1-8-201ENST00000364272 125 ntBASIC16.41■□□□□ 0.22
NEDD4P46934 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
NEDD4P46934 GGTLC4P-201ENST00000402176 664 ntBASIC16.41■□□□□ 0.22
NEDD4P46934 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.41■□□□□ 0.22
NEDD4P46934 RNA5SP417-201ENST00000516459 108 ntBASIC16.41■□□□□ 0.22
NEDD4P46934 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
NEDD4P46934 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC16.41■□□□□ 0.22
NEDD4P46934 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC16.41■□□□□ 0.22
NEDD4P46934 MIR4326-201ENST00000582203 59 ntBASIC16.41■□□□□ 0.22
NEDD4P46934 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.41■□□□□ 0.22
NEDD4P46934 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.41■□□□□ 0.22
NEDD4P46934 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.41■□□□□ 0.22
NEDD4P46934 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
NEDD4P46934 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.41■□□□□ 0.22
NEDD4P46934 AC087392.5-201ENST00000612517 489 ntBASIC16.41■□□□□ 0.22
NEDD4P46934 ABCD1P2-201ENST00000429313 1601 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms