Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.21□□□□□ -0.29
CHMP24386 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CHMP24386 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.21□□□□□ -0.29
CHMP24386 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.21□□□□□ -0.29
CHMP24386 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CHMP24386 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CHMP24386 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
CHMP24386 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.21□□□□□ -0.29
CHMP24386 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CHMP24386 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.21□□□□□ -0.29
CHMP24386 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
CHMP24386 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CHMP24386 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.21□□□□□ -0.29
CHMP24386 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.21□□□□□ -0.29
CHMP24386 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 AC104073.2-201ENST00000453737 312 ntBASIC13.21□□□□□ -0.29
CHMP24386 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.21□□□□□ -0.29
CHMP24386 MARK2P5-201ENST00000507649 634 ntBASIC13.21□□□□□ -0.29
CHMP24386 AC008805.1-201ENST00000590892 364 ntBASIC13.21□□□□□ -0.29
CHMP24386 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.21□□□□□ -0.29
CHMP24386 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CHMP24386 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CHMP24386 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.21□□□□□ -0.29
CHMP24386 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 AC005014.1-201ENST00000432006 2976 ntBASIC13.21□□□□□ -0.29
CHMP24386 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.21□□□□□ -0.29
CHMP24386 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CHMP24386 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHMP24386 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHMP24386 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.21□□□□□ -0.3
CHMP24386 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
CHMP24386 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.21□□□□□ -0.3
CHMP24386 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CHMP24386 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CHMP24386 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
CHMP24386 MIR193BHG-211ENST00000641433 5365 ntBASIC13.21□□□□□ -0.3
CHMP24386 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHMP24386 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHMP24386 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
CHMP24386 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 AC073869.1-201ENST00000415574 2762 ntBASIC13.2□□□□□ -0.3
CHMP24386 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
CHMP24386 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.2□□□□□ -0.3
CHMP24386 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.2□□□□□ -0.3
CHMP24386 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.2□□□□□ -0.3
CHMP24386 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CHMP24386 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.2□□□□□ -0.3
CHMP24386 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CHMP24386 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CHMP24386 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CHMP24386 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.2□□□□□ -0.3
CHMP24386 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CHMP24386 AL391647.1-201ENST00000395664 511 ntBASIC13.2□□□□□ -0.3
CHMP24386 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.2□□□□□ -0.3
CHMP24386 AC136604.1-202ENST00000425471 771 ntBASIC13.2□□□□□ -0.3
CHMP24386 AC016700.1-201ENST00000429424 312 ntBASIC13.2□□□□□ -0.3
CHMP24386 AC011742.3-201ENST00000439053 820 ntBASIC13.2□□□□□ -0.3
CHMP24386 VDAC1P1-201ENST00000439229 848 ntBASIC13.2□□□□□ -0.3
CHMP24386 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.2□□□□□ -0.3
CHMP24386 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.2□□□□□ -0.3
CHMP24386 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
CHMP24386 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.2□□□□□ -0.3
CHMP24386 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.2□□□□□ -0.3
CHMP24386 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.2□□□□□ -0.3
CHMP24386 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.2□□□□□ -0.3
CHMP24386 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.2□□□□□ -0.3
CHMP24386 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.2□□□□□ -0.3
CHMP24386 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHMP24386 SNORD3B-2-202ENST00000571722 791 ntBASIC13.2□□□□□ -0.3
CHMP24386 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms