Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SOX11P35716 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SOX11P35716 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
SOX11P35716 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SOX11P35716 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SOX11P35716 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SOX11P35716 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SOX11P35716 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.93□□□□□ -0.18
SOX11P35716 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SOX11P35716 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SOX11P35716 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SOX11P35716 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SOX11P35716 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SOX11P35716 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SOX11P35716 AC020910.5-201ENST00000623668 1865 ntBASIC13.93□□□□□ -0.18
SOX11P35716 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.93□□□□□ -0.18
SOX11P35716 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
SOX11P35716 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SOX11P35716 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SOX11P35716 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SOX11P35716 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.93□□□□□ -0.18
SOX11P35716 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.92□□□□□ -0.18
SOX11P35716 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.92□□□□□ -0.18
SOX11P35716 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 MRPL37P1-201ENST00000592451 1337 ntBASIC13.92□□□□□ -0.18
SOX11P35716 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
SOX11P35716 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC13.92□□□□□ -0.18
SOX11P35716 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.92□□□□□ -0.18
SOX11P35716 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SOX11P35716 AL136309.1-201ENST00000403917 691 ntBASIC13.92□□□□□ -0.18
SOX11P35716 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.92□□□□□ -0.18
SOX11P35716 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.92□□□□□ -0.18
SOX11P35716 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC13.92□□□□□ -0.18
SOX11P35716 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.92□□□□□ -0.18
SOX11P35716 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.92□□□□□ -0.18
SOX11P35716 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.92□□□□□ -0.18
SOX11P35716 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.92□□□□□ -0.18
SOX11P35716 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC13.92□□□□□ -0.18
SOX11P35716 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.92□□□□□ -0.18
SOX11P35716 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.92□□□□□ -0.18
SOX11P35716 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.92□□□□□ -0.18
SOX11P35716 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.92□□□□□ -0.18
SOX11P35716 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.92□□□□□ -0.18
SOX11P35716 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SOX11P35716 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.92□□□□□ -0.18
SOX11P35716 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SOX11P35716 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.92□□□□□ -0.18
SOX11P35716 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SOX11P35716 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.92□□□□□ -0.18
SOX11P35716 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 AC073869.1-201ENST00000415574 2762 ntBASIC13.92□□□□□ -0.18
SOX11P35716 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
SOX11P35716 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX11P35716 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.91□□□□□ -0.18
SOX11P35716 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SOX11P35716 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SOX11P35716 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX11P35716 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SOX11P35716 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SOX11P35716 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SOX11P35716 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SOX11P35716 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX11P35716 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.91□□□□□ -0.18
SOX11P35716 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX11P35716 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.91□□□□□ -0.18
SOX11P35716 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SOX11P35716 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.91□□□□□ -0.18
SOX11P35716 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX11P35716 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.91□□□□□ -0.18
SOX11P35716 PCDHB18P-202ENST00000526308 3197 ntBASIC13.91□□□□□ -0.18
SOX11P35716 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.91□□□□□ -0.18
SOX11P35716 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX11P35716 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SOX11P35716 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.91□□□□□ -0.18
SOX11P35716 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SOX11P35716 CALR4P-201ENST00000431943 946 ntBASIC13.91□□□□□ -0.18
SOX11P35716 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.91□□□□□ -0.18
SOX11P35716 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms