Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMAD6O43541 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.13□□□□□ -0.15
SMAD6O43541 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.13□□□□□ -0.15
SMAD6O43541 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.13□□□□□ -0.15
SMAD6O43541 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.13□□□□□ -0.15
SMAD6O43541 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.13□□□□□ -0.15
SMAD6O43541 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.13□□□□□ -0.15
SMAD6O43541 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.13□□□□□ -0.15
SMAD6O43541 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SMAD6O43541 AC018463.1-201ENST00000456674 917 ntBASIC14.13□□□□□ -0.15
SMAD6O43541 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.13□□□□□ -0.15
SMAD6O43541 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SMAD6O43541 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.13□□□□□ -0.15
SMAD6O43541 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SMAD6O43541 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.13□□□□□ -0.15
SMAD6O43541 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.13□□□□□ -0.15
SMAD6O43541 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.13□□□□□ -0.15
SMAD6O43541 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SMAD6O43541 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
SMAD6O43541 AL009176.1-201ENST00000607876 650 ntBASIC14.13□□□□□ -0.15
SMAD6O43541 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.13□□□□□ -0.15
SMAD6O43541 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.13□□□□□ -0.15
SMAD6O43541 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SMAD6O43541 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.13□□□□□ -0.15
SMAD6O43541 AC023794.5-201ENST00000564380 2157 ntBASIC14.13□□□□□ -0.15
SMAD6O43541 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.13□□□□□ -0.15
SMAD6O43541 AC005014.1-201ENST00000432006 2976 ntBASIC14.13□□□□□ -0.15
SMAD6O43541 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.13□□□□□ -0.15
SMAD6O43541 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.13□□□□□ -0.15
SMAD6O43541 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMAD6O43541 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.12□□□□□ -0.15
SMAD6O43541 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SMAD6O43541 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 AC090502.4-201ENST00000551714 1386 ntBASIC14.12□□□□□ -0.15
SMAD6O43541 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SMAD6O43541 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.12□□□□□ -0.15
SMAD6O43541 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SMAD6O43541 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SMAD6O43541 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.12□□□□□ -0.15
SMAD6O43541 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 RPL17P11-201ENST00000417593 544 ntBASIC14.12□□□□□ -0.15
SMAD6O43541 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 AC004837.1-201ENST00000446267 564 ntBASIC14.12□□□□□ -0.15
SMAD6O43541 LYPLA2P1-203ENST00000447689 696 ntBASIC14.12□□□□□ -0.15
SMAD6O43541 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.12□□□□□ -0.15
SMAD6O43541 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.12□□□□□ -0.15
SMAD6O43541 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.12□□□□□ -0.15
SMAD6O43541 RN7SKP155-201ENST00000516031 288 ntBASIC14.12□□□□□ -0.15
SMAD6O43541 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC14.12□□□□□ -0.15
SMAD6O43541 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.12□□□□□ -0.15
SMAD6O43541 NT5C-204ENST00000578337 582 ntTSL 2 BASIC14.12□□□□□ -0.15
SMAD6O43541 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SMAD6O43541 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.12□□□□□ -0.15
SMAD6O43541 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.12□□□□□ -0.15
SMAD6O43541 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 AC072061.1-201ENST00000569710 2234 ntBASIC14.12□□□□□ -0.15
SMAD6O43541 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.12□□□□□ -0.15
SMAD6O43541 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SMAD6O43541 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms