Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 AL583805.1-201ENST00000391389 531 ntBASIC12.35□□□□□ -0.43
TMEM54Q969K7 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 AC007279.1-201ENST00000448547 837 ntBASIC12.35□□□□□ -0.43
TMEM54Q969K7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 RN7SL788P-201ENST00000460504 316 ntBASIC12.35□□□□□ -0.43
TMEM54Q969K7 RN7SL67P-201ENST00000492147 296 ntBASIC12.35□□□□□ -0.43
TMEM54Q969K7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 MIR3677-201ENST00000578964 60 ntBASIC12.35□□□□□ -0.43
TMEM54Q969K7 SIGLEC18P-201ENST00000602271 909 ntBASIC12.35□□□□□ -0.43
TMEM54Q969K7 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 AL139099.5-201ENST00000635274 300 ntBASIC12.35□□□□□ -0.43
TMEM54Q969K7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 AC138627.1-207ENST00000641560 1006 ntBASIC12.35□□□□□ -0.43
TMEM54Q969K7 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 NRADDP-202ENST00000641269 1585 ntBASIC12.35□□□□□ -0.43
TMEM54Q969K7 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 ZNF493-208ENST00000599461 1769 ntBASIC12.34□□□□□ -0.43
TMEM54Q969K7 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 AL807761.2-201ENST00000422849 729 ntBASIC12.34□□□□□ -0.43
TMEM54Q969K7 AC005722.1-201ENST00000431878 964 ntBASIC12.34□□□□□ -0.43
TMEM54Q969K7 AL133466.1-201ENST00000447582 150 ntBASIC12.34□□□□□ -0.43
TMEM54Q969K7 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 COQ10BP2-201ENST00000513804 724 ntBASIC12.34□□□□□ -0.43
TMEM54Q969K7 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 AC145285.5-201ENST00000562217 361 ntBASIC12.34□□□□□ -0.43
TMEM54Q969K7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 AC007326.1-201ENST00000604539 458 ntBASIC12.34□□□□□ -0.43
TMEM54Q969K7 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms