Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 KRT8P31-201ENST00000504812 1408 ntBASIC14.92□□□□□ -0.02
ATP2A3Q93084 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 TCAM1P-207ENST00000485295 1537 ntBASIC14.92□□□□□ -0.02
ATP2A3Q93084 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 AC090505.1-201ENST00000430515 1834 ntBASIC14.92□□□□□ -0.02
ATP2A3Q93084 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 CICP16-201ENST00000502609 2813 ntBASIC14.92□□□□□ -0.02
ATP2A3Q93084 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 RPSAP31-201ENST00000416648 895 ntBASIC14.92□□□□□ -0.02
ATP2A3Q93084 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 AL807761.2-201ENST00000422849 729 ntBASIC14.92□□□□□ -0.02
ATP2A3Q93084 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 AC079112.1-201ENST00000454972 939 ntBASIC14.92□□□□□ -0.02
ATP2A3Q93084 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 CHCHD2P9-201ENST00000461726 456 ntBASIC14.92□□□□□ -0.02
ATP2A3Q93084 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 SIGLEC18P-201ENST00000602271 909 ntBASIC14.92□□□□□ -0.02
ATP2A3Q93084 AC138894.2-201ENST00000602838 371 ntBASIC14.92□□□□□ -0.02
ATP2A3Q93084 RN7SL736P-201ENST00000613111 269 ntBASIC14.92□□□□□ -0.02
ATP2A3Q93084 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 AL591471.1-201ENST00000621855 229 ntBASIC14.92□□□□□ -0.02
ATP2A3Q93084 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 FP325330.2-201ENST00000624219 5630 ntBASIC14.92□□□□□ -0.02
ATP2A3Q93084 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATP2A3Q93084 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.92□□□□□ -0.02
ATP2A3Q93084 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ATP2A3Q93084 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
ATP2A3Q93084 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.91□□□□□ -0.02
ATP2A3Q93084 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.91□□□□□ -0.02
ATP2A3Q93084 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 AL512430.1-201ENST00000392575 860 ntBASIC14.91□□□□□ -0.02
ATP2A3Q93084 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.91□□□□□ -0.02
ATP2A3Q93084 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.91□□□□□ -0.02
ATP2A3Q93084 AC087045.2-201ENST00000606279 1003 ntBASIC14.91□□□□□ -0.02
ATP2A3Q93084 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.91□□□□□ -0.02
ATP2A3Q93084 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ATP2A3Q93084 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
ATP2A3Q93084 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.91□□□□□ -0.02
ATP2A3Q93084 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 PCDHA5-203ENST00000614258 4248 ntBASIC14.91□□□□□ -0.02
ATP2A3Q93084 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.91□□□□□ -0.02
ATP2A3Q93084 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
ATP2A3Q93084 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATP2A3Q93084 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms