Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PDIA3P2-201ENST00000428073 158 ntBASIC12.73□□□□□ -0.37
APOBEC1P41238 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.73□□□□□ -0.37
APOBEC1P41238 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.73□□□□□ -0.37
APOBEC1P41238 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.73□□□□□ -0.37
APOBEC1P41238 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.73□□□□□ -0.37
APOBEC1P41238 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.73□□□□□ -0.37
APOBEC1P41238 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
APOBEC1P41238 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.73□□□□□ -0.37
APOBEC1P41238 ACTG1P17-201ENST00000558391 1119 ntBASIC12.73□□□□□ -0.37
APOBEC1P41238 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.73□□□□□ -0.37
APOBEC1P41238 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.73□□□□□ -0.37
APOBEC1P41238 AC026803.1-201ENST00000569130 274 ntBASIC12.73□□□□□ -0.37
APOBEC1P41238 MIR3619-201ENST00000579667 83 ntBASIC12.73□□□□□ -0.37
APOBEC1P41238 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.73□□□□□ -0.37
APOBEC1P41238 AL109837.1-201ENST00000603272 613 ntBASIC12.73□□□□□ -0.37
APOBEC1P41238 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.73□□□□□ -0.37
APOBEC1P41238 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.73□□□□□ -0.37
APOBEC1P41238 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
APOBEC1P41238 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOBEC1P41238 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.73□□□□□ -0.37
APOBEC1P41238 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOBEC1P41238 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOBEC1P41238 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
APOBEC1P41238 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOBEC1P41238 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
APOBEC1P41238 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOBEC1P41238 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOBEC1P41238 CICP20-201ENST00000443330 2801 ntBASIC12.73□□□□□ -0.37
APOBEC1P41238 FMO6P-201ENST00000236166 1620 ntBASIC12.73□□□□□ -0.37
APOBEC1P41238 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOBEC1P41238 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
APOBEC1P41238 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.73□□□□□ -0.37
APOBEC1P41238 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.73□□□□□ -0.37
APOBEC1P41238 AC009474.1-201ENST00000455096 1565 ntBASIC12.73□□□□□ -0.37
APOBEC1P41238 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOBEC1P41238 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
APOBEC1P41238 NCLP1-201ENST00000445357 1963 ntBASIC12.72□□□□□ -0.37
APOBEC1P41238 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBEC1P41238 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBEC1P41238 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.72□□□□□ -0.37
APOBEC1P41238 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
APOBEC1P41238 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.72□□□□□ -0.37
APOBEC1P41238 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.72□□□□□ -0.37
APOBEC1P41238 AC073548.1-201ENST00000624088 1882 ntBASIC12.72□□□□□ -0.37
APOBEC1P41238 AL591122.2-201ENST00000624125 1853 ntBASIC12.72□□□□□ -0.37
APOBEC1P41238 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
APOBEC1P41238 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.72□□□□□ -0.37
APOBEC1P41238 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
APOBEC1P41238 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
APOBEC1P41238 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBEC1P41238 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.72□□□□□ -0.37
APOBEC1P41238 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.72□□□□□ -0.37
APOBEC1P41238 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.72□□□□□ -0.37
APOBEC1P41238 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBEC1P41238 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.72□□□□□ -0.37
APOBEC1P41238 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
APOBEC1P41238 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBEC1P41238 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBEC1P41238 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBEC1P41238 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOBEC1P41238 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
APOBEC1P41238 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBEC1P41238 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
APOBEC1P41238 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.72□□□□□ -0.37
APOBEC1P41238 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOBEC1P41238 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.72□□□□□ -0.37
APOBEC1P41238 PPP1R2P4-201ENST00000424051 595 ntBASIC12.72□□□□□ -0.37
APOBEC1P41238 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.72□□□□□ -0.37
APOBEC1P41238 AL133466.1-201ENST00000447582 150 ntBASIC12.72□□□□□ -0.37
APOBEC1P41238 DUTP3-201ENST00000450025 415 ntBASIC12.72□□□□□ -0.37
APOBEC1P41238 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.72□□□□□ -0.37
APOBEC1P41238 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.72□□□□□ -0.37
APOBEC1P41238 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.72□□□□□ -0.37
APOBEC1P41238 MIR4754-201ENST00000582477 89 ntBASIC12.72□□□□□ -0.37
APOBEC1P41238 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
APOBEC1P41238 AC020922.3-201ENST00000595064 547 ntBASIC12.72□□□□□ -0.37
APOBEC1P41238 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.72□□□□□ -0.37
APOBEC1P41238 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.72□□□□□ -0.37
APOBEC1P41238 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBEC1P41238 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOBEC1P41238 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOBEC1P41238 SALL4P6-201ENST00000429385 1691 ntBASIC12.72□□□□□ -0.37
APOBEC1P41238 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.72□□□□□ -0.37
APOBEC1P41238 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBEC1P41238 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBEC1P41238 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.72□□□□□ -0.37
APOBEC1P41238 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBEC1P41238 AC089987.1-201ENST00000551654 2209 ntBASIC12.72□□□□□ -0.37
APOBEC1P41238 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.72□□□□□ -0.37
APOBEC1P41238 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.72□□□□□ -0.37
APOBEC1P41238 AC025183.3-201ENST00000623526 1482 ntBASIC12.72□□□□□ -0.37
APOBEC1P41238 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBEC1P41238 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
APOBEC1P41238 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
APOBEC1P41238 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
APOBEC1P41238 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms