Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RXRBP28702 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC17.79■□□□□ 0.44
RXRBP28702 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 MTND6P9-201ENST00000458075 519 ntBASIC17.79■□□□□ 0.44
RXRBP28702 TSACC-206ENST00000466306 477 ntTSL 3 BASIC17.79■□□□□ 0.44
RXRBP28702 ASS1P9-201ENST00000513426 1236 ntBASIC17.79■□□□□ 0.44
RXRBP28702 AC136475.6-201ENST00000533113 289 ntBASIC17.79■□□□□ 0.44
RXRBP28702 SLC16A7-209ENST00000549465 537 ntTSL 3 BASIC17.79■□□□□ 0.44
RXRBP28702 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC17.79■□□□□ 0.44
RXRBP28702 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 C5orf60-208ENST00000625191 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.79■□□□□ 0.44
RXRBP28702 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 AC034205.3-201ENST00000603595 1376 ntBASIC17.79■□□□□ 0.44
RXRBP28702 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RXRBP28702 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
RXRBP28702 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RXRBP28702 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RXRBP28702 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC17.78■□□□□ 0.44
RXRBP28702 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RXRBP28702 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RXRBP28702 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
RXRBP28702 ACTBP1-201ENST00000417985 1113 ntBASIC17.78■□□□□ 0.44
RXRBP28702 NME6-211ENST00000447314 621 ntTSL 3 BASIC17.78■□□□□ 0.44
RXRBP28702 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC17.78■□□□□ 0.44
RXRBP28702 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RXRBP28702 AP001180.4-201ENST00000584167 823 ntTSL 3 BASIC17.78■□□□□ 0.44
RXRBP28702 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC17.78■□□□□ 0.44
RXRBP28702 AL137028.1-201ENST00000620521 555 ntBASIC17.78■□□□□ 0.44
RXRBP28702 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RXRBP28702 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RXRBP28702 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RXRBP28702 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RXRBP28702 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RXRBP28702 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC17.78■□□□□ 0.44
RXRBP28702 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RXRBP28702 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RXRBP28702 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.78■□□□□ 0.44
RXRBP28702 NRADDP-202ENST00000641269 1585 ntBASIC17.78■□□□□ 0.44
RXRBP28702 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RXRBP28702 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.78■□□□□ 0.44
RXRBP28702 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RXRBP28702 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RXRBP28702 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.78■□□□□ 0.44
RXRBP28702 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RXRBP28702 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RXRBP28702 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RXRBP28702 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC17.77■□□□□ 0.44
RXRBP28702 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RXRBP28702 NBEAP3-201ENST00000420638 1493 ntBASIC17.77■□□□□ 0.44
RXRBP28702 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC17.77■□□□□ 0.44
RXRBP28702 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RXRBP28702 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RXRBP28702 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RXRBP28702 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RXRBP28702 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RXRBP28702 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RXRBP28702 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.77■□□□□ 0.44
RXRBP28702 TPI1P3-201ENST00000335020 740 ntBASIC17.77■□□□□ 0.44
RXRBP28702 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC17.77■□□□□ 0.44
RXRBP28702 FTH1P19-201ENST00000402402 528 ntBASIC17.77■□□□□ 0.44
RXRBP28702 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC17.77■□□□□ 0.44
RXRBP28702 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC17.77■□□□□ 0.44
RXRBP28702 AC103706.1-201ENST00000561761 679 ntBASIC17.77■□□□□ 0.44
RXRBP28702 AC002347.2-201ENST00000584139 171 ntTSL 3 BASIC17.77■□□□□ 0.44
RXRBP28702 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC17.77■□□□□ 0.44
RXRBP28702 Z69706.1-201ENST00000595428 547 ntBASIC17.77■□□□□ 0.44
RXRBP28702 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC17.77■□□□□ 0.44
RXRBP28702 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RXRBP28702 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RXRBP28702 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RXRBP28702 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RXRBP28702 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
RXRBP28702 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC17.77■□□□□ 0.43
RXRBP28702 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC17.77■□□□□ 0.43
RXRBP28702 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
RXRBP28702 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC17.77■□□□□ 0.43
RXRBP28702 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
RXRBP28702 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.77■□□□□ 0.43
RXRBP28702 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
RXRBP28702 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.77■□□□□ 0.43
RXRBP28702 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RXRBP28702 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC17.76■□□□□ 0.43
RXRBP28702 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.76■□□□□ 0.43
RXRBP28702 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms