Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.56□□□□□ -0.24
HTR1EP28566 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.56□□□□□ -0.24
HTR1EP28566 COX5BP1-201ENST00000507622 393 ntBASIC13.56□□□□□ -0.24
HTR1EP28566 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.56□□□□□ -0.24
HTR1EP28566 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
HTR1EP28566 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.56□□□□□ -0.24
HTR1EP28566 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.56□□□□□ -0.24
HTR1EP28566 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.56□□□□□ -0.24
HTR1EP28566 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
HTR1EP28566 AC138649.2-201ENST00000615886 705 ntBASIC13.56□□□□□ -0.24
HTR1EP28566 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HTR1EP28566 AC091812.3-201ENST00000621362 345 ntBASIC13.56□□□□□ -0.24
HTR1EP28566 AC004623.1-201ENST00000624592 2127 ntBASIC13.56□□□□□ -0.24
HTR1EP28566 AC002472.3-201ENST00000640124 621 ntBASIC13.56□□□□□ -0.24
HTR1EP28566 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HTR1EP28566 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HTR1EP28566 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.56□□□□□ -0.24
HTR1EP28566 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
HTR1EP28566 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HTR1EP28566 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.56□□□□□ -0.24
HTR1EP28566 LINC01165-201ENST00000445190 1623 ntBASIC13.56□□□□□ -0.24
HTR1EP28566 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.56□□□□□ -0.24
HTR1EP28566 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HTR1EP28566 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HTR1EP28566 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HTR1EP28566 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HTR1EP28566 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HTR1EP28566 MSNP1-201ENST00000511640 1732 ntBASIC13.56□□□□□ -0.24
HTR1EP28566 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.55□□□□□ -0.24
HTR1EP28566 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HTR1EP28566 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
HTR1EP28566 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.55□□□□□ -0.24
HTR1EP28566 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HTR1EP28566 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.55□□□□□ -0.24
HTR1EP28566 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.55□□□□□ -0.24
HTR1EP28566 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.55□□□□□ -0.24
HTR1EP28566 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
HTR1EP28566 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.55□□□□□ -0.24
HTR1EP28566 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.55□□□□□ -0.24
HTR1EP28566 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.55□□□□□ -0.24
HTR1EP28566 CYP46A4P-201ENST00000414953 267 ntBASIC13.55□□□□□ -0.24
HTR1EP28566 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.55□□□□□ -0.24
HTR1EP28566 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.55□□□□□ -0.24
HTR1EP28566 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.55□□□□□ -0.24
HTR1EP28566 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.55□□□□□ -0.24
HTR1EP28566 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.55□□□□□ -0.24
HTR1EP28566 RN7SL720P-201ENST00000488178 304 ntBASIC13.55□□□□□ -0.24
HTR1EP28566 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.55□□□□□ -0.24
HTR1EP28566 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.55□□□□□ -0.24
HTR1EP28566 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.55□□□□□ -0.24
HTR1EP28566 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.55□□□□□ -0.24
HTR1EP28566 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.55□□□□□ -0.24
HTR1EP28566 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.55□□□□□ -0.24
HTR1EP28566 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.55□□□□□ -0.24
HTR1EP28566 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HTR1EP28566 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.55□□□□□ -0.24
HTR1EP28566 SPCS2P2-201ENST00000603270 608 ntBASIC13.55□□□□□ -0.24
HTR1EP28566 AC097724.1-201ENST00000609581 426 ntBASIC13.55□□□□□ -0.24
HTR1EP28566 AC007663.3-201ENST00000609632 465 ntBASIC13.55□□□□□ -0.24
HTR1EP28566 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.55□□□□□ -0.24
HTR1EP28566 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
HTR1EP28566 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.55□□□□□ -0.24
HTR1EP28566 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.55□□□□□ -0.24
HTR1EP28566 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HTR1EP28566 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
HTR1EP28566 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 AC026271.4-201ENST00000578214 1833 ntBASIC13.55□□□□□ -0.24
HTR1EP28566 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HTR1EP28566 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms