Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.82□□□□□ -0.2
PCNAP12004 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 GOLGA2P4-201ENST00000441462 777 ntBASIC13.82□□□□□ -0.2
PCNAP12004 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.82□□□□□ -0.2
PCNAP12004 AC022217.1-201ENST00000521069 738 ntBASIC13.82□□□□□ -0.2
PCNAP12004 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.82□□□□□ -0.2
PCNAP12004 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.82□□□□□ -0.2
PCNAP12004 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.82□□□□□ -0.2
PCNAP12004 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.82□□□□□ -0.2
PCNAP12004 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.82□□□□□ -0.2
PCNAP12004 AC140658.4-201ENST00000561990 352 ntBASIC13.82□□□□□ -0.2
PCNAP12004 AC104982.3-201ENST00000581995 514 ntBASIC13.82□□□□□ -0.2
PCNAP12004 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.82□□□□□ -0.2
PCNAP12004 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.82□□□□□ -0.2
PCNAP12004 AC007663.3-201ENST00000609632 465 ntBASIC13.82□□□□□ -0.2
PCNAP12004 AL023803.2-201ENST00000620080 638 ntBASIC13.82□□□□□ -0.2
PCNAP12004 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.82□□□□□ -0.2
PCNAP12004 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
PCNAP12004 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PCNAP12004 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.82□□□□□ -0.2
PCNAP12004 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.82□□□□□ -0.2
PCNAP12004 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PCNAP12004 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
PCNAP12004 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PCNAP12004 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
PCNAP12004 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.81□□□□□ -0.2
PCNAP12004 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
PCNAP12004 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.81□□□□□ -0.2
PCNAP12004 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PCNAP12004 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
PCNAP12004 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.81□□□□□ -0.2
PCNAP12004 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 MIR663B-201ENST00000408361 115 ntBASIC13.81□□□□□ -0.2
PCNAP12004 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.81□□□□□ -0.2
PCNAP12004 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.81□□□□□ -0.2
PCNAP12004 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.81□□□□□ -0.2
PCNAP12004 AC003686.1-201ENST00000550956 1034 ntBASIC13.81□□□□□ -0.2
PCNAP12004 AL583810.1-201ENST00000553344 1045 ntBASIC13.81□□□□□ -0.2
PCNAP12004 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.81□□□□□ -0.2
PCNAP12004 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.81□□□□□ -0.2
PCNAP12004 BAP1-211ENST00000615113 489 ntBASIC13.81□□□□□ -0.2
PCNAP12004 AC090386.2-201ENST00000623010 1039 ntBASIC13.81□□□□□ -0.2
PCNAP12004 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.81□□□□□ -0.2
PCNAP12004 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.81□□□□□ -0.2
PCNAP12004 AC092299.1-201ENST00000632679 757 ntBASIC13.81□□□□□ -0.2
PCNAP12004 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.81□□□□□ -0.2
PCNAP12004 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.81□□□□□ -0.2
PCNAP12004 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.81□□□□□ -0.2
PCNAP12004 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PCNAP12004 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.81□□□□□ -0.2
PCNAP12004 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 AC004899.1-201ENST00000424687 1714 ntBASIC13.81□□□□□ -0.2
PCNAP12004 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.81□□□□□ -0.2
PCNAP12004 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.81□□□□□ -0.2
PCNAP12004 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCNAP12004 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.81□□□□□ -0.2
PCNAP12004 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.81□□□□□ -0.2
PCNAP12004 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.8□□□□□ -0.2
PCNAP12004 AL591122.2-201ENST00000624125 1853 ntBASIC13.8□□□□□ -0.2
PCNAP12004 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.8□□□□□ -0.2
PCNAP12004 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms