Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL031768.1-201ENST00000606542 701 ntBASIC23.62■■□□□ 1.37
TOP2AP11388 PSME2-217ENST00000615264 874 ntTSL 5 BASIC23.62■■□□□ 1.37
TOP2AP11388 PSME2-218ENST00000630027 185 ntTSL 3 BASIC23.62■■□□□ 1.37
TOP2AP11388 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC23.62■■□□□ 1.37
TOP2AP11388 MYB-201ENST00000316528 3571 ntTSL 5 BASIC23.62■■□□□ 1.37
TOP2AP11388 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC23.62■■□□□ 1.37
TOP2AP11388 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
TOP2AP11388 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC23.62■■□□□ 1.37
TOP2AP11388 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
TOP2AP11388 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC23.62■■□□□ 1.37
TOP2AP11388 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
TOP2AP11388 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TOP2AP11388 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC23.62■■□□□ 1.37
TOP2AP11388 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
TOP2AP11388 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TOP2AP11388 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
TOP2AP11388 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TOP2AP11388 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TOP2AP11388 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TOP2AP11388 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TOP2AP11388 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC23.61■■□□□ 1.37
TOP2AP11388 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TOP2AP11388 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TOP2AP11388 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
TOP2AP11388 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC23.61■■□□□ 1.37
TOP2AP11388 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC23.61■■□□□ 1.37
TOP2AP11388 AP000343.1-201ENST00000440602 385 ntBASIC23.61■■□□□ 1.37
TOP2AP11388 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC23.61■■□□□ 1.37
TOP2AP11388 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TOP2AP11388 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC23.61■■□□□ 1.37
TOP2AP11388 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC23.61■■□□□ 1.37
TOP2AP11388 JPT2-214ENST00000569765 782 ntTSL 2 BASIC23.61■■□□□ 1.37
TOP2AP11388 AC010601.2-201ENST00000623060 774 ntBASIC23.61■■□□□ 1.37
TOP2AP11388 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TOP2AP11388 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC23.61■■□□□ 1.37
TOP2AP11388 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC23.61■■□□□ 1.37
TOP2AP11388 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TOP2AP11388 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TOP2AP11388 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TOP2AP11388 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TOP2AP11388 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TOP2AP11388 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TOP2AP11388 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC23.6■■□□□ 1.37
TOP2AP11388 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TOP2AP11388 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
TOP2AP11388 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC23.6■■□□□ 1.37
TOP2AP11388 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
TOP2AP11388 AC005822.1-201ENST00000414124 1034 ntBASIC23.6■■□□□ 1.37
TOP2AP11388 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC23.6■■□□□ 1.37
TOP2AP11388 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TOP2AP11388 MIR4539-201ENST00000579784 60 ntBASIC23.6■■□□□ 1.37
TOP2AP11388 ACTBP9-201ENST00000587663 1099 ntBASIC23.6■■□□□ 1.37
TOP2AP11388 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC23.6■■□□□ 1.37
TOP2AP11388 AL033381.2-201ENST00000603854 732 ntBASIC23.6■■□□□ 1.37
TOP2AP11388 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC23.6■■□□□ 1.37
TOP2AP11388 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
TOP2AP11388 AC005912.2-201ENST00000619492 2400 ntBASIC23.6■■□□□ 1.37
TOP2AP11388 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC23.6■■□□□ 1.37
TOP2AP11388 GSN-203ENST00000373808 2664 ntTSL 2 BASIC23.6■■□□□ 1.37
TOP2AP11388 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TOP2AP11388 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TOP2AP11388 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TOP2AP11388 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
TOP2AP11388 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
TOP2AP11388 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TOP2AP11388 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TOP2AP11388 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TOP2AP11388 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TOP2AP11388 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TOP2AP11388 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TOP2AP11388 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC23.6■■□□□ 1.37
TOP2AP11388 AC135506.1-201ENST00000603877 1799 ntBASIC23.6■■□□□ 1.37
TOP2AP11388 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
TOP2AP11388 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TOP2AP11388 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC23.6■■□□□ 1.37
TOP2AP11388 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
TOP2AP11388 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TOP2AP11388 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TOP2AP11388 NOS2P3-201ENST00000411468 867 ntBASIC23.59■■□□□ 1.37
TOP2AP11388 NOS2P2-201ENST00000426269 867 ntBASIC23.59■■□□□ 1.37
TOP2AP11388 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC23.59■■□□□ 1.37
TOP2AP11388 MYL6-215ENST00000549566 685 ntTSL 2 BASIC23.59■■□□□ 1.37
TOP2AP11388 AC005332.2-201ENST00000590010 930 ntBASIC23.59■■□□□ 1.37
TOP2AP11388 AL353622.2-201ENST00000605846 425 ntBASIC23.59■■□□□ 1.37
TOP2AP11388 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC23.59■■□□□ 1.37
TOP2AP11388 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC23.59■■□□□ 1.37
TOP2AP11388 AC099795.2-201ENST00000639582 440 ntBASIC23.59■■□□□ 1.37
TOP2AP11388 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
TOP2AP11388 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TOP2AP11388 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC23.59■■□□□ 1.37
TOP2AP11388 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC23.59■■□□□ 1.37
TOP2AP11388 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
TOP2AP11388 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC23.59■■□□□ 1.37
TOP2AP11388 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TOP2AP11388 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC23.59■■□□□ 1.37
TOP2AP11388 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
TOP2AP11388 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC23.59■■□□□ 1.37
TOP2AP11388 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TOP2AP11388 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC23.59■■□□□ 1.37
TOP2AP11388 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms