Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC16.7■□□□□ 0.26
SNED1Q8TER0 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC16.7■□□□□ 0.26
SNED1Q8TER0 AC007191.1-201ENST00000623179 2995 ntBASIC16.7■□□□□ 0.26
SNED1Q8TER0 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNED1Q8TER0 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.7■□□□□ 0.26
SNED1Q8TER0 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNED1Q8TER0 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNED1Q8TER0 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNED1Q8TER0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNED1Q8TER0 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNED1Q8TER0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SNED1Q8TER0 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SNED1Q8TER0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNED1Q8TER0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SNED1Q8TER0 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNED1Q8TER0 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNED1Q8TER0 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNED1Q8TER0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNED1Q8TER0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SNED1Q8TER0 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNED1Q8TER0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SNED1Q8TER0 AC016397.2-201ENST00000624848 1985 ntBASIC16.69■□□□□ 0.26
SNED1Q8TER0 SDCBP2P1-201ENST00000416115 614 ntBASIC16.69■□□□□ 0.26
SNED1Q8TER0 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC16.69■□□□□ 0.26
SNED1Q8TER0 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNED1Q8TER0 OR4C14P-201ENST00000440929 923 ntBASIC16.69■□□□□ 0.26
SNED1Q8TER0 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC16.69■□□□□ 0.26
SNED1Q8TER0 IGKV1OR-2-201ENST00000457995 350 ntBASIC16.69■□□□□ 0.26
SNED1Q8TER0 GYG1-209ENST00000483267 801 ntTSL 2 BASIC16.69■□□□□ 0.26
SNED1Q8TER0 MTHFD2P7-201ENST00000483867 983 ntBASIC16.69■□□□□ 0.26
SNED1Q8TER0 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNED1Q8TER0 METTL7AP1-201ENST00000547343 496 ntBASIC16.69■□□□□ 0.26
SNED1Q8TER0 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC16.69■□□□□ 0.26
SNED1Q8TER0 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNED1Q8TER0 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC16.69■□□□□ 0.26
SNED1Q8TER0 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SNED1Q8TER0 NF1P11-201ENST00000621292 1282 ntBASIC16.69■□□□□ 0.26
SNED1Q8TER0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNED1Q8TER0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNED1Q8TER0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC16.68■□□□□ 0.26
SNED1Q8TER0 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.68■□□□□ 0.26
SNED1Q8TER0 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SNED1Q8TER0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
SNED1Q8TER0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SNED1Q8TER0 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC16.68■□□□□ 0.26
SNED1Q8TER0 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SNED1Q8TER0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.68■□□□□ 0.26
SNED1Q8TER0 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC16.68■□□□□ 0.26
SNED1Q8TER0 AC007679.1-201ENST00000458609 502 ntBASIC16.68■□□□□ 0.26
SNED1Q8TER0 ISL1-203ENST00000511384 981 ntTSL 5 BASIC16.68■□□□□ 0.26
SNED1Q8TER0 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
SNED1Q8TER0 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC16.68■□□□□ 0.26
SNED1Q8TER0 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC16.68■□□□□ 0.26
SNED1Q8TER0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.68■□□□□ 0.26
SNED1Q8TER0 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.68■□□□□ 0.26
SNED1Q8TER0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.68■□□□□ 0.26
SNED1Q8TER0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.68■□□□□ 0.26
SNED1Q8TER0 HSPA7-201ENST00000445535 1927 ntBASIC16.68■□□□□ 0.26
SNED1Q8TER0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNED1Q8TER0 AC152010.1-201ENST00000415779 2006 ntBASIC16.68■□□□□ 0.26
SNED1Q8TER0 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.67■□□□□ 0.26
SNED1Q8TER0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.67■□□□□ 0.26
SNED1Q8TER0 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.67■□□□□ 0.26
SNED1Q8TER0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SNED1Q8TER0 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 KRT8P6-201ENST00000399259 1207 ntBASIC16.67■□□□□ 0.26
SNED1Q8TER0 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms