Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC15.57■□□□□ 0.08
TM4SF4P48230 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.57■□□□□ 0.08
TM4SF4P48230 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TM4SF4P48230 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TM4SF4P48230 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TM4SF4P48230 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TM4SF4P48230 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
TM4SF4P48230 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TM4SF4P48230 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TM4SF4P48230 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
TM4SF4P48230 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TM4SF4P48230 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TM4SF4P48230 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TM4SF4P48230 BX640514.1-201ENST00000583223 1918 ntBASIC15.56■□□□□ 0.08
TM4SF4P48230 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TM4SF4P48230 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TM4SF4P48230 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
TM4SF4P48230 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.56■□□□□ 0.08
TM4SF4P48230 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.56■□□□□ 0.08
TM4SF4P48230 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.56■□□□□ 0.08
TM4SF4P48230 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
TM4SF4P48230 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
TM4SF4P48230 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TM4SF4P48230 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC15.56■□□□□ 0.08
TM4SF4P48230 CLK2P1-201ENST00000416636 1294 ntBASIC15.56■□□□□ 0.08
TM4SF4P48230 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC15.56■□□□□ 0.08
TM4SF4P48230 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 RPL21P135-201ENST00000442539 791 ntBASIC15.56■□□□□ 0.08
TM4SF4P48230 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC15.56■□□□□ 0.08
TM4SF4P48230 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC15.56■□□□□ 0.08
TM4SF4P48230 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC15.56■□□□□ 0.08
TM4SF4P48230 PIGCP1-201ENST00000527583 895 ntBASIC15.56■□□□□ 0.08
TM4SF4P48230 DDX11L8-201ENST00000535849 366 ntBASIC15.56■□□□□ 0.08
TM4SF4P48230 AC063924.1-201ENST00000546680 673 ntBASIC15.56■□□□□ 0.08
TM4SF4P48230 AC090825.2-201ENST00000557959 739 ntBASIC15.56■□□□□ 0.08
TM4SF4P48230 IGHV1OR16-3-201ENST00000568138 205 ntBASIC15.56■□□□□ 0.08
TM4SF4P48230 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC15.56■□□□□ 0.08
TM4SF4P48230 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC15.56■□□□□ 0.08
TM4SF4P48230 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC15.56■□□□□ 0.08
TM4SF4P48230 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC15.56■□□□□ 0.08
TM4SF4P48230 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.56■□□□□ 0.08
TM4SF4P48230 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC15.56■□□□□ 0.08
TM4SF4P48230 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
TM4SF4P48230 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 HSPA7-201ENST00000445535 1927 ntBASIC15.56■□□□□ 0.08
TM4SF4P48230 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TM4SF4P48230 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.56■□□□□ 0.08
TM4SF4P48230 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.56■□□□□ 0.08
TM4SF4P48230 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TM4SF4P48230 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.56■□□□□ 0.08
TM4SF4P48230 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.56■□□□□ 0.08
TM4SF4P48230 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TM4SF4P48230 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM4SF4P48230 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
TM4SF4P48230 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
TM4SF4P48230 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
TM4SF4P48230 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 AC026471.1-201ENST00000564629 3026 ntBASIC15.55■□□□□ 0.08
TM4SF4P48230 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.55■□□□□ 0.08
TM4SF4P48230 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TM4SF4P48230 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.55■□□□□ 0.08
TM4SF4P48230 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 KRT8P24-201ENST00000560290 1559 ntBASIC15.55■□□□□ 0.08
TM4SF4P48230 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC15.55■□□□□ 0.08
TM4SF4P48230 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 AC061965.1-201ENST00000560524 1465 ntBASIC15.55■□□□□ 0.08
TM4SF4P48230 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 AC069061.4-201ENST00000581294 1347 ntBASIC15.55■□□□□ 0.08
TM4SF4P48230 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 PGAM1P10-201ENST00000402426 761 ntBASIC15.55■□□□□ 0.08
TM4SF4P48230 AL391903.1-201ENST00000407513 365 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms