Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
ERCC3P19447 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ERCC3P19447 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC16.35■□□□□ 0.21
ERCC3P19447 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 CCT8L1P-201ENST00000465400 1674 ntBASIC16.35■□□□□ 0.21
ERCC3P19447 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ERCC3P19447 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.35■□□□□ 0.21
ERCC3P19447 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.35■□□□□ 0.21
ERCC3P19447 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.35■□□□□ 0.21
ERCC3P19447 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
ERCC3P19447 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.35■□□□□ 0.21
ERCC3P19447 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.35■□□□□ 0.21
ERCC3P19447 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.35■□□□□ 0.21
ERCC3P19447 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ERCC3P19447 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ERCC3P19447 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.34■□□□□ 0.21
ERCC3P19447 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.34■□□□□ 0.21
ERCC3P19447 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
ERCC3P19447 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
ERCC3P19447 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.34■□□□□ 0.21
ERCC3P19447 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.34■□□□□ 0.21
ERCC3P19447 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.34■□□□□ 0.21
ERCC3P19447 RPL35P9-201ENST00000446059 350 ntBASIC16.34■□□□□ 0.21
ERCC3P19447 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.34■□□□□ 0.21
ERCC3P19447 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ERCC3P19447 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.34■□□□□ 0.21
ERCC3P19447 AC138466.4-201ENST00000623965 852 ntBASIC16.34■□□□□ 0.21
ERCC3P19447 AC002044.2-201ENST00000624910 970 ntBASIC16.34■□□□□ 0.21
ERCC3P19447 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.34■□□□□ 0.21
ERCC3P19447 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ERCC3P19447 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ERCC3P19447 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC3P19447 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.33■□□□□ 0.21
ERCC3P19447 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ERCC3P19447 AC079781.5-202ENST00000641784 3743 ntBASIC16.33■□□□□ 0.21
ERCC3P19447 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.33■□□□□ 0.21
ERCC3P19447 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.33■□□□□ 0.21
ERCC3P19447 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ERCC3P19447 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
ERCC3P19447 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC3P19447 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ERCC3P19447 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC3P19447 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC3P19447 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC3P19447 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC3P19447 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC3P19447 MIR1227-201ENST00000408484 88 ntBASIC16.33■□□□□ 0.2
ERCC3P19447 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC3P19447 AC006987.1-201ENST00000413610 527 ntBASIC16.33■□□□□ 0.2
ERCC3P19447 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.33■□□□□ 0.2
ERCC3P19447 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.33■□□□□ 0.2
ERCC3P19447 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.33■□□□□ 0.2
ERCC3P19447 AC022447.6-201ENST00000515522 438 ntBASIC16.33■□□□□ 0.2
ERCC3P19447 RNA5SP406-201ENST00000516106 112 ntBASIC16.33■□□□□ 0.2
ERCC3P19447 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.33■□□□□ 0.2
ERCC3P19447 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.33■□□□□ 0.2
ERCC3P19447 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC3P19447 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.33■□□□□ 0.2
ERCC3P19447 MIR4472-1-201ENST00000584349 80 ntBASIC16.33■□□□□ 0.2
ERCC3P19447 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.33■□□□□ 0.2
ERCC3P19447 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC3P19447 AC104506.1-201ENST00000609247 429 ntBASIC16.33■□□□□ 0.2
ERCC3P19447 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms