Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.6□□□□□ -0.39
VRK1Q99986 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 CSPG4P11-201ENST00000560634 4910 ntBASIC12.6□□□□□ -0.39
VRK1Q99986 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.6□□□□□ -0.39
VRK1Q99986 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.6□□□□□ -0.39
VRK1Q99986 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
VRK1Q99986 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.6□□□□□ -0.39
VRK1Q99986 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
VRK1Q99986 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
VRK1Q99986 AL662890.1-201ENST00000396818 632 ntBASIC12.6□□□□□ -0.39
VRK1Q99986 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.6□□□□□ -0.39
VRK1Q99986 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.6□□□□□ -0.39
VRK1Q99986 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.6□□□□□ -0.39
VRK1Q99986 FAM58BP-201ENST00000439056 645 ntBASIC12.6□□□□□ -0.39
VRK1Q99986 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.6□□□□□ -0.39
VRK1Q99986 RN7SL11P-201ENST00000471305 293 ntBASIC12.6□□□□□ -0.39
VRK1Q99986 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 AC022447.6-201ENST00000515522 438 ntBASIC12.6□□□□□ -0.39
VRK1Q99986 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.6□□□□□ -0.39
VRK1Q99986 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.6□□□□□ -0.39
VRK1Q99986 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.6□□□□□ -0.39
VRK1Q99986 AC008805.1-201ENST00000590892 364 ntBASIC12.6□□□□□ -0.39
VRK1Q99986 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.6□□□□□ -0.39
VRK1Q99986 BNIP3P13-201ENST00000599968 566 ntBASIC12.6□□□□□ -0.39
VRK1Q99986 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.6□□□□□ -0.39
VRK1Q99986 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.6□□□□□ -0.39
VRK1Q99986 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.6□□□□□ -0.39
VRK1Q99986 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.6□□□□□ -0.39
VRK1Q99986 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.6□□□□□ -0.39
VRK1Q99986 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.6□□□□□ -0.39
VRK1Q99986 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.6□□□□□ -0.39
VRK1Q99986 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.6□□□□□ -0.39
VRK1Q99986 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.6□□□□□ -0.39
VRK1Q99986 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.6□□□□□ -0.39
VRK1Q99986 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
VRK1Q99986 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
VRK1Q99986 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VRK1Q99986 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.6□□□□□ -0.39
VRK1Q99986 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.59□□□□□ -0.39
VRK1Q99986 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.59□□□□□ -0.39
VRK1Q99986 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.59□□□□□ -0.39
VRK1Q99986 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 DNM1P41-201ENST00000623634 3350 ntBASIC12.59□□□□□ -0.39
VRK1Q99986 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
VRK1Q99986 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
VRK1Q99986 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 CYP46A4P-201ENST00000414953 267 ntBASIC12.59□□□□□ -0.39
VRK1Q99986 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.59□□□□□ -0.39
VRK1Q99986 AL008707.1-201ENST00000422498 534 ntBASIC12.59□□□□□ -0.39
VRK1Q99986 AC016700.1-201ENST00000429424 312 ntBASIC12.59□□□□□ -0.39
VRK1Q99986 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.59□□□□□ -0.39
VRK1Q99986 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.59□□□□□ -0.39
VRK1Q99986 AL133466.1-201ENST00000447582 150 ntBASIC12.59□□□□□ -0.39
VRK1Q99986 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.59□□□□□ -0.39
VRK1Q99986 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.59□□□□□ -0.39
VRK1Q99986 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.59□□□□□ -0.39
VRK1Q99986 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
VRK1Q99986 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.59□□□□□ -0.39
VRK1Q99986 AC009955.4-201ENST00000597192 544 ntBASIC12.59□□□□□ -0.39
VRK1Q99986 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
VRK1Q99986 AC008825.2-201ENST00000603374 718 ntBASIC12.59□□□□□ -0.39
VRK1Q99986 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
VRK1Q99986 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.59□□□□□ -0.39
VRK1Q99986 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms