Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NR4A2P43354 POM121L4P-202ENST00000427789 1891 ntBASIC12.96□□□□□ -0.33
NR4A2P43354 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NR4A2P43354 POM121L14P-201ENST00000406100 1558 ntBASIC12.96□□□□□ -0.33
NR4A2P43354 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.96□□□□□ -0.33
NR4A2P43354 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NR4A2P43354 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NR4A2P43354 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
NR4A2P43354 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NR4A2P43354 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NR4A2P43354 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
NR4A2P43354 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.96□□□□□ -0.33
NR4A2P43354 CNN2P8-201ENST00000421872 913 ntBASIC12.96□□□□□ -0.33
NR4A2P43354 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NR4A2P43354 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.96□□□□□ -0.33
NR4A2P43354 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NR4A2P43354 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NR4A2P43354 GAPDHP40-201ENST00000505218 1006 ntBASIC12.96□□□□□ -0.33
NR4A2P43354 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.96□□□□□ -0.33
NR4A2P43354 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.96□□□□□ -0.33
NR4A2P43354 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.96□□□□□ -0.33
NR4A2P43354 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.96□□□□□ -0.33
NR4A2P43354 DUX4L45-201ENST00000566406 1057 ntBASIC12.96□□□□□ -0.33
NR4A2P43354 AC025279.2-201ENST00000569730 653 ntBASIC12.96□□□□□ -0.33
NR4A2P43354 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.96□□□□□ -0.33
NR4A2P43354 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.96□□□□□ -0.33
NR4A2P43354 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.96□□□□□ -0.33
NR4A2P43354 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NR4A2P43354 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NR4A2P43354 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NR4A2P43354 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NR4A2P43354 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
NR4A2P43354 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NR4A2P43354 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
NR4A2P43354 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NR4A2P43354 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NR4A2P43354 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NR4A2P43354 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NR4A2P43354 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NR4A2P43354 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NR4A2P43354 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.96□□□□□ -0.34
NR4A2P43354 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.96□□□□□ -0.34
NR4A2P43354 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
NR4A2P43354 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NR4A2P43354 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC12.96□□□□□ -0.34
NR4A2P43354 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NR4A2P43354 AL138799.1-201ENST00000448213 1675 ntBASIC12.96□□□□□ -0.34
NR4A2P43354 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.96□□□□□ -0.34
NR4A2P43354 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NR4A2P43354 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NR4A2P43354 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.95□□□□□ -0.34
NR4A2P43354 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.95□□□□□ -0.34
NR4A2P43354 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
NR4A2P43354 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NR4A2P43354 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.95□□□□□ -0.34
NR4A2P43354 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 AC090643.2-201ENST00000623442 2029 ntBASIC12.95□□□□□ -0.34
NR4A2P43354 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.95□□□□□ -0.34
NR4A2P43354 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NR4A2P43354 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.95□□□□□ -0.34
NR4A2P43354 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.95□□□□□ -0.34
NR4A2P43354 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.95□□□□□ -0.34
NR4A2P43354 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 AC108725.1-201ENST00000495472 409 ntBASIC12.95□□□□□ -0.34
NR4A2P43354 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.95□□□□□ -0.34
NR4A2P43354 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.95□□□□□ -0.34
NR4A2P43354 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 RN7SL560P-201ENST00000577943 264 ntBASIC12.95□□□□□ -0.34
NR4A2P43354 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.95□□□□□ -0.34
NR4A2P43354 MIR6074-201ENST00000612054 107 ntBASIC12.95□□□□□ -0.34
NR4A2P43354 AC009542.2-202ENST00000619004 1067 ntBASIC12.95□□□□□ -0.34
NR4A2P43354 BX539320.1-201ENST00000623759 877 ntBASIC12.95□□□□□ -0.34
NR4A2P43354 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.95□□□□□ -0.34
NR4A2P43354 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC12.95□□□□□ -0.34
NR4A2P43354 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC12.95□□□□□ -0.34
NR4A2P43354 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.95□□□□□ -0.34
NR4A2P43354 AC112176.1-201ENST00000565428 3024 ntBASIC12.95□□□□□ -0.34
NR4A2P43354 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.95□□□□□ -0.34
NR4A2P43354 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NR4A2P43354 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms