Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.3□□□□□ -0.12
VCLP18206 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VCLP18206 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.3□□□□□ -0.12
VCLP18206 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.3□□□□□ -0.12
VCLP18206 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.3□□□□□ -0.12
VCLP18206 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.3□□□□□ -0.12
VCLP18206 AL133338.1-201ENST00000565695 1517 ntBASIC14.3□□□□□ -0.12
VCLP18206 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VCLP18206 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.3□□□□□ -0.12
VCLP18206 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
VCLP18206 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
VCLP18206 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.3□□□□□ -0.12
VCLP18206 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VCLP18206 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
VCLP18206 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.29□□□□□ -0.12
VCLP18206 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.29□□□□□ -0.12
VCLP18206 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
VCLP18206 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.29□□□□□ -0.12
VCLP18206 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VCLP18206 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.29□□□□□ -0.12
VCLP18206 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.29□□□□□ -0.12
VCLP18206 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.29□□□□□ -0.12
VCLP18206 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.29□□□□□ -0.12
VCLP18206 AC016700.1-201ENST00000429424 312 ntBASIC14.29□□□□□ -0.12
VCLP18206 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 AC022217.1-201ENST00000521069 738 ntBASIC14.29□□□□□ -0.12
VCLP18206 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.29□□□□□ -0.12
VCLP18206 AC009779.1-201ENST00000551138 283 ntBASIC14.29□□□□□ -0.12
VCLP18206 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.29□□□□□ -0.12
VCLP18206 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.29□□□□□ -0.12
VCLP18206 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.29□□□□□ -0.12
VCLP18206 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.29□□□□□ -0.12
VCLP18206 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.29□□□□□ -0.12
VCLP18206 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
VCLP18206 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VCLP18206 AC064801.2-201ENST00000625052 1303 ntBASIC14.29□□□□□ -0.12
VCLP18206 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VCLP18206 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
VCLP18206 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.29□□□□□ -0.12
VCLP18206 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
VCLP18206 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.29□□□□□ -0.12
VCLP18206 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
VCLP18206 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VCLP18206 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.28□□□□□ -0.12
VCLP18206 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
VCLP18206 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
VCLP18206 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.28□□□□□ -0.12
VCLP18206 RN7SKP214-201ENST00000364208 315 ntBASIC14.28□□□□□ -0.12
VCLP18206 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.28□□□□□ -0.12
VCLP18206 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
VCLP18206 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.28□□□□□ -0.12
VCLP18206 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.28□□□□□ -0.12
VCLP18206 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.28□□□□□ -0.12
VCLP18206 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.28□□□□□ -0.12
VCLP18206 RCC2P8-201ENST00000502779 1035 ntBASIC14.28□□□□□ -0.12
VCLP18206 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.28□□□□□ -0.12
VCLP18206 ZNF767P-206ENST00000513792 565 ntBASIC14.28□□□□□ -0.12
VCLP18206 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VCLP18206 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.28□□□□□ -0.12
VCLP18206 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.28□□□□□ -0.12
VCLP18206 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
VCLP18206 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.28□□□□□ -0.12
VCLP18206 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.28□□□□□ -0.12
VCLP18206 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.28□□□□□ -0.12
VCLP18206 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.28□□□□□ -0.12
VCLP18206 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VCLP18206 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms