Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.78□□□□□ -0.36
PPP3CBP16298 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC12.78□□□□□ -0.36
PPP3CBP16298 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.78□□□□□ -0.36
PPP3CBP16298 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.78□□□□□ -0.36
PPP3CBP16298 HLA-DPB2-205ENST00000435074 1188 ntBASIC12.78□□□□□ -0.36
PPP3CBP16298 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PPP3CBP16298 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.78□□□□□ -0.36
PPP3CBP16298 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
PPP3CBP16298 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.78□□□□□ -0.36
PPP3CBP16298 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PPP3CBP16298 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.78□□□□□ -0.36
PPP3CBP16298 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.78□□□□□ -0.36
PPP3CBP16298 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.78□□□□□ -0.36
PPP3CBP16298 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
PPP3CBP16298 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PPP3CBP16298 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PPP3CBP16298 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
PPP3CBP16298 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.78□□□□□ -0.36
PPP3CBP16298 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.78□□□□□ -0.36
PPP3CBP16298 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.78□□□□□ -0.36
PPP3CBP16298 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
PPP3CBP16298 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PPP3CBP16298 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PPP3CBP16298 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.77□□□□□ -0.36
PPP3CBP16298 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
PPP3CBP16298 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PPP3CBP16298 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
PPP3CBP16298 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PPP3CBP16298 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
PPP3CBP16298 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
PPP3CBP16298 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
PPP3CBP16298 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.77□□□□□ -0.36
PPP3CBP16298 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PPP3CBP16298 AC004241.5-201ENST00000623870 2448 ntBASIC12.77□□□□□ -0.37
PPP3CBP16298 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PPP3CBP16298 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
PPP3CBP16298 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.77□□□□□ -0.37
PPP3CBP16298 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.77□□□□□ -0.37
PPP3CBP16298 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
PPP3CBP16298 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PPP3CBP16298 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
PPP3CBP16298 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PPP3CBP16298 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.77□□□□□ -0.37
PPP3CBP16298 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.77□□□□□ -0.37
PPP3CBP16298 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.77□□□□□ -0.37
PPP3CBP16298 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.77□□□□□ -0.37
PPP3CBP16298 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PPP3CBP16298 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.77□□□□□ -0.37
PPP3CBP16298 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.77□□□□□ -0.37
PPP3CBP16298 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
PPP3CBP16298 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.77□□□□□ -0.37
PPP3CBP16298 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.77□□□□□ -0.37
PPP3CBP16298 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.77□□□□□ -0.37
PPP3CBP16298 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.77□□□□□ -0.37
PPP3CBP16298 FGFR3P5-201ENST00000564496 886 ntBASIC12.77□□□□□ -0.37
PPP3CBP16298 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PPP3CBP16298 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.77□□□□□ -0.37
PPP3CBP16298 MIR3188-201ENST00000583494 85 ntBASIC12.77□□□□□ -0.37
PPP3CBP16298 AC020922.3-201ENST00000595064 547 ntBASIC12.77□□□□□ -0.37
PPP3CBP16298 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.77□□□□□ -0.37
PPP3CBP16298 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.77□□□□□ -0.37
PPP3CBP16298 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.77□□□□□ -0.37
PPP3CBP16298 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.77□□□□□ -0.37
PPP3CBP16298 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PPP3CBP16298 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PPP3CBP16298 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PPP3CBP16298 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.77□□□□□ -0.37
PPP3CBP16298 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PPP3CBP16298 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
PPP3CBP16298 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
PPP3CBP16298 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.77□□□□□ -0.37
PPP3CBP16298 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.77□□□□□ -0.37
PPP3CBP16298 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
PPP3CBP16298 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.77□□□□□ -0.37
PPP3CBP16298 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
PPP3CBP16298 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PPP3CBP16298 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PPP3CBP16298 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
PPP3CBP16298 AL118506.1-201ENST00000601296 3082 ntBASIC12.77□□□□□ -0.37
PPP3CBP16298 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.77□□□□□ -0.37
PPP3CBP16298 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
PPP3CBP16298 AL590440.2-201ENST00000641973 1595 ntBASIC12.77□□□□□ -0.37
PPP3CBP16298 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PPP3CBP16298 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
PPP3CBP16298 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
PPP3CBP16298 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PPP3CBP16298 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PPP3CBP16298 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.77□□□□□ -0.37
PPP3CBP16298 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms