Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SFTPBP07988 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SFTPBP07988 AL591122.2-201ENST00000624125 1853 ntBASIC12.4□□□□□ -0.42
SFTPBP07988 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SFTPBP07988 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
SFTPBP07988 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
SFTPBP07988 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SFTPBP07988 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
SFTPBP07988 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SFTPBP07988 TUBB1P2-201ENST00000422712 1306 ntBASIC12.39□□□□□ -0.43
SFTPBP07988 TUBB1P1-201ENST00000503144 1300 ntBASIC12.39□□□□□ -0.43
SFTPBP07988 TUBB8P4-201ENST00000511806 1324 ntBASIC12.39□□□□□ -0.43
SFTPBP07988 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SFTPBP07988 AGAP10P-201ENST00000454844 2418 ntBASIC12.39□□□□□ -0.43
SFTPBP07988 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SFTPBP07988 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SFTPBP07988 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.39□□□□□ -0.43
SFTPBP07988 AC009093.10-201ENST00000641956 1442 ntBASIC12.39□□□□□ -0.43
SFTPBP07988 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SFTPBP07988 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SFTPBP07988 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SFTPBP07988 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SFTPBP07988 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SFTPBP07988 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.39□□□□□ -0.43
SFTPBP07988 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.39□□□□□ -0.43
SFTPBP07988 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SFTPBP07988 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SFTPBP07988 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.39□□□□□ -0.43
SFTPBP07988 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SFTPBP07988 ACTBP11-201ENST00000436287 1126 ntBASIC12.39□□□□□ -0.43
SFTPBP07988 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SFTPBP07988 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.39□□□□□ -0.43
SFTPBP07988 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.39□□□□□ -0.43
SFTPBP07988 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SFTPBP07988 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.39□□□□□ -0.43
SFTPBP07988 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.39□□□□□ -0.43
SFTPBP07988 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.39□□□□□ -0.43
SFTPBP07988 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.39□□□□□ -0.43
SFTPBP07988 RN7SL560P-201ENST00000577943 264 ntBASIC12.39□□□□□ -0.43
SFTPBP07988 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SFTPBP07988 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.39□□□□□ -0.43
SFTPBP07988 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.39□□□□□ -0.43
SFTPBP07988 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SFTPBP07988 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.39□□□□□ -0.43
SFTPBP07988 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.39□□□□□ -0.43
SFTPBP07988 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SFTPBP07988 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SFTPBP07988 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
SFTPBP07988 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.39□□□□□ -0.43
SFTPBP07988 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.39□□□□□ -0.43
SFTPBP07988 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SFTPBP07988 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SFTPBP07988 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SFTPBP07988 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.39□□□□□ -0.43
SFTPBP07988 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SFTPBP07988 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.39□□□□□ -0.43
SFTPBP07988 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SFTPBP07988 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SFTPBP07988 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SFTPBP07988 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 AL022313.4-201ENST00000562756 2046 ntBASIC12.38□□□□□ -0.43
SFTPBP07988 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.38□□□□□ -0.43
SFTPBP07988 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.38□□□□□ -0.43
SFTPBP07988 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.38□□□□□ -0.43
SFTPBP07988 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.38□□□□□ -0.43
SFTPBP07988 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.38□□□□□ -0.43
SFTPBP07988 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
SFTPBP07988 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.38□□□□□ -0.43
SFTPBP07988 CD8B2-202ENST00000417670 633 ntBASIC12.38□□□□□ -0.43
SFTPBP07988 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.38□□□□□ -0.43
SFTPBP07988 AL161932.2-201ENST00000435436 679 ntBASIC12.38□□□□□ -0.43
SFTPBP07988 CICP12-201ENST00000455801 843 ntBASIC12.38□□□□□ -0.43
SFTPBP07988 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.38□□□□□ -0.43
SFTPBP07988 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.38□□□□□ -0.43
SFTPBP07988 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.38□□□□□ -0.43
SFTPBP07988 COX5BP1-201ENST00000507622 393 ntBASIC12.38□□□□□ -0.43
SFTPBP07988 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.38□□□□□ -0.43
SFTPBP07988 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SFTPBP07988 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SFTPBP07988 AP006547.1-201ENST00000563435 692 ntBASIC12.38□□□□□ -0.43
SFTPBP07988 AC005586.2-201ENST00000563946 837 ntBASIC12.38□□□□□ -0.43
SFTPBP07988 DUX4L45-201ENST00000566406 1057 ntBASIC12.38□□□□□ -0.43
SFTPBP07988 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.38□□□□□ -0.43
SFTPBP07988 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.38□□□□□ -0.43
SFTPBP07988 AC073413.1-201ENST00000603927 732 ntBASIC12.38□□□□□ -0.43
SFTPBP07988 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms