Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 C8orf86-202ENST00000437935 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 TGIF2P1-201ENST00000435390 685 ntBASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 RPE-208ENST00000436630 1128 ntTSL 2 BASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 CTSLP1-201ENST00000457530 1002 ntBASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 RN7SL292P-201ENST00000473305 266 ntBASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 TCP10-205ENST00000476779 646 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 RAET1G-203ENST00000479265 1078 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 RN7SL328P-201ENST00000484033 300 ntBASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 STAMBP-211ENST00000536064 845 ntTSL 5 BASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 HSPA7-201ENST00000445535 1927 ntBASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 HPD-204ENST00000543163 1709 ntTSL 5 BASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIMBP3Q9UFD9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 OR2T32P-201ENST00000403423 963 ntBASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 AK4P5-201ENST00000404520 634 ntBASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 CYTOR-202ENST00000409054 1096 ntTSL 2 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 SYP-AS1-201ENST00000433499 542 ntTSL 2 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 AC003958.1-201ENST00000435883 421 ntBASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 AC104123.1-201ENST00000502645 473 ntTSL 5 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 MYL6B-207ENST00000550443 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 MYL6B-210ENST00000552568 703 ntTSL 5 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 MIR3194-201ENST00000582236 73 ntBASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 SH3GL1P2-201ENST00000582245 1082 ntBASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 NTM-201ENST00000374784 1315 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 AP001610.1-201ENST00000411427 1116 ntTSL 5 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 HNRNPA1P33-201ENST00000421426 561 ntBASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 PHBP8-201ENST00000493810 725 ntBASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 COPZ1-207ENST00000549116 736 ntTSL 2 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 AC027237.4-201ENST00000560870 694 ntTSL 3 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 HP-215ENST00000569639 568 ntTSL 4 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 ACAP1-204ENST00000570504 274 ntTSL 3 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 MXRA7-205ENST00000588114 521 ntAPPRIS ALT2 TSL 4 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 AC083841.4-201ENST00000637396 352 ntBASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC21.11■□□□□ 0.97
RIMBP3Q9UFD9 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 AC005549.1-201ENST00000579438 1629 ntBASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 TPD52L3-203ENST00000381428 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 TUBD1-203ENST00000346141 1490 ntTSL 2 BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 GAPDHP1-201ENST00000452570 1005 ntBASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 SNHG14-207ENST00000452731 1064 ntTSL 5 BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 AC008040.3-201ENST00000493762 1232 ntBASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 MESTP2-201ENST00000559787 889 ntBASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 LINC00969-247ENST00000608737 956 ntTSL 5 BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 GSN-209ENST00000449733 2702 ntTSL 2 BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 TMBIM7P-203ENST00000641617 1718 ntBASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIMBP3Q9UFD9 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms