Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 KRT17P5-201ENST00000332088 839 ntBASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 AL356740.1-201ENST00000602192 1297 ntBASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 AC073869.1-201ENST00000415574 2762 ntBASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 ZNF493-208ENST00000599461 1769 ntBASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 AF013593.1-201ENST00000458074 1487 ntBASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 AC114271.1-201ENST00000612689 2813 ntBASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 PPP1R2P4-201ENST00000424051 595 ntBASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 AP001258.2-201ENST00000529891 490 ntBASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 AL021707.6-201ENST00000609212 491 ntBASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 AL008721.1-201ENST00000609964 604 ntBASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms