Protein–RNA interactions for Protein: Q8TAT5

NEIL3, Endonuclease 8-like 3, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3Q8TAT5 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 ACTG1P2-201ENST00000415776 1125 ntBASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 ACTG1P11-201ENST00000425411 1125 ntBASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 AC078875.1-201ENST00000431907 724 ntBASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 AC024681.1-201ENST00000521917 487 ntBASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 AL161670.2-201ENST00000557650 1227 ntBASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 AC133540.1-201ENST00000620845 1019 ntBASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 AC091812.3-201ENST00000621362 345 ntBASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 AC111170.3-201ENST00000624282 2464 ntBASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 AC019294.4-201ENST00000561777 2905 ntBASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NEIL3Q8TAT5 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 KRT8P28-201ENST00000433288 1390 ntBASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 Z82170.1-201ENST00000625081 3192 ntBASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 UPF3AP2-201ENST00000457924 1132 ntBASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 AC103988.2-201ENST00000561804 725 ntBASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 TMBIM7P-202ENST00000641474 1516 ntBASIC13.21□□□□□ -0.29
NEIL3Q8TAT5 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 1436.1 ms