Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 NKAIN1P1-201ENST00000435754 582 ntBASIC14.96□□□□□ -0.01
CHRNA3P32297 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNA3P32297 SCARNA20.5-201ENST00000516991 142 ntBASIC14.96□□□□□ -0.01
CHRNA3P32297 AC044849.1-201ENST00000519737 1188 ntBASIC14.96□□□□□ -0.01
CHRNA3P32297 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNA3P32297 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNA3P32297 AC132192.2-201ENST00000596206 1147 ntBASIC14.96□□□□□ -0.01
CHRNA3P32297 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.96□□□□□ -0.01
CHRNA3P32297 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.96□□□□□ -0.01
CHRNA3P32297 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.96□□□□□ -0.01
CHRNA3P32297 AC022748.3-201ENST00000621828 275 ntBASIC14.96□□□□□ -0.01
CHRNA3P32297 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CHRNA3P32297 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHRNA3P32297 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHRNA3P32297 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.96□□□□□ -0.02
CHRNA3P32297 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CHRNA3P32297 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHRNA3P32297 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHRNA3P32297 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CHRNA3P32297 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHRNA3P32297 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRNA3P32297 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 MKRN5P-201ENST00000445263 1467 ntBASIC14.95□□□□□ -0.02
CHRNA3P32297 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CHRNA3P32297 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
CHRNA3P32297 PCDHA5-203ENST00000614258 4248 ntBASIC14.95□□□□□ -0.02
CHRNA3P32297 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNA3P32297 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
CHRNA3P32297 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 AC019294.4-201ENST00000561777 2905 ntBASIC14.95□□□□□ -0.02
CHRNA3P32297 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 FNTAP2-201ENST00000430308 634 ntBASIC14.95□□□□□ -0.02
CHRNA3P32297 FAM58BP-201ENST00000439056 645 ntBASIC14.95□□□□□ -0.02
CHRNA3P32297 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.95□□□□□ -0.02
CHRNA3P32297 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.95□□□□□ -0.02
CHRNA3P32297 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.95□□□□□ -0.02
CHRNA3P32297 BNIP3P13-201ENST00000599968 566 ntBASIC14.95□□□□□ -0.02
CHRNA3P32297 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNA3P32297 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRNA3P32297 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 ABCD1P2-201ENST00000429313 1601 ntBASIC14.95□□□□□ -0.02
CHRNA3P32297 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 MEX3B-202ENST00000558133 4333 ntBASIC14.95□□□□□ -0.02
CHRNA3P32297 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CHRNA3P32297 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CHRNA3P32297 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRNA3P32297 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA3P32297 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNA3P32297 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CHRNA3P32297 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CHRNA3P32297 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA3P32297 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA3P32297 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA3P32297 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA3P32297 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CHRNA3P32297 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CHRNA3P32297 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.94□□□□□ -0.02
CHRNA3P32297 CALR4P-201ENST00000431943 946 ntBASIC14.94□□□□□ -0.02
CHRNA3P32297 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNA3P32297 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.94□□□□□ -0.02
CHRNA3P32297 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA3P32297 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNA3P32297 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.94□□□□□ -0.02
CHRNA3P32297 EIF4HP1-201ENST00000453115 687 ntBASIC14.94□□□□□ -0.02
CHRNA3P32297 BX284668.4-201ENST00000453917 508 ntBASIC14.94□□□□□ -0.02
CHRNA3P32297 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.94□□□□□ -0.02
CHRNA3P32297 AC005740.2-201ENST00000511085 419 ntBASIC14.94□□□□□ -0.02
CHRNA3P32297 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNA3P32297 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.94□□□□□ -0.02
CHRNA3P32297 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.94□□□□□ -0.02
CHRNA3P32297 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNA3P32297 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA3P32297 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms