Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PCNAP12004 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.87□□□□□ -0.19
PCNAP12004 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
PCNAP12004 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.87□□□□□ -0.19
PCNAP12004 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.87□□□□□ -0.19
PCNAP12004 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 RNMTL1P1-201ENST00000454103 560 ntBASIC13.87□□□□□ -0.19
PCNAP12004 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.87□□□□□ -0.19
PCNAP12004 RPL13AP20-201ENST00000459725 609 ntBASIC13.87□□□□□ -0.19
PCNAP12004 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.87□□□□□ -0.19
PCNAP12004 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.87□□□□□ -0.19
PCNAP12004 RNA5SP412-201ENST00000516234 123 ntBASIC13.87□□□□□ -0.19
PCNAP12004 AL160314.3-201ENST00000556041 767 ntBASIC13.87□□□□□ -0.19
PCNAP12004 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.87□□□□□ -0.19
PCNAP12004 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.87□□□□□ -0.19
PCNAP12004 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
PCNAP12004 AC133540.1-201ENST00000620845 1019 ntBASIC13.87□□□□□ -0.19
PCNAP12004 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PCNAP12004 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.87□□□□□ -0.19
PCNAP12004 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.87□□□□□ -0.19
PCNAP12004 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PCNAP12004 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.87□□□□□ -0.19
PCNAP12004 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PCNAP12004 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.87□□□□□ -0.19
PCNAP12004 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.87□□□□□ -0.19
PCNAP12004 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
PCNAP12004 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.86□□□□□ -0.19
PCNAP12004 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
PCNAP12004 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.86□□□□□ -0.19
PCNAP12004 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PCNAP12004 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PCNAP12004 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PCNAP12004 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
PCNAP12004 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
PCNAP12004 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.86□□□□□ -0.19
PCNAP12004 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.86□□□□□ -0.19
PCNAP12004 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.86□□□□□ -0.19
PCNAP12004 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
PCNAP12004 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
PCNAP12004 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PCNAP12004 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.86□□□□□ -0.19
PCNAP12004 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.86□□□□□ -0.19
PCNAP12004 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.86□□□□□ -0.19
PCNAP12004 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.86□□□□□ -0.19
PCNAP12004 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.86□□□□□ -0.19
PCNAP12004 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.86□□□□□ -0.19
PCNAP12004 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
PCNAP12004 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.86□□□□□ -0.19
PCNAP12004 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.86□□□□□ -0.19
PCNAP12004 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.86□□□□□ -0.19
PCNAP12004 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
PCNAP12004 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.86□□□□□ -0.19
PCNAP12004 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.86□□□□□ -0.19
PCNAP12004 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.86□□□□□ -0.19
PCNAP12004 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.86□□□□□ -0.19
PCNAP12004 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
PCNAP12004 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.86□□□□□ -0.19
PCNAP12004 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCNAP12004 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms