Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC008026.2-201ENST00000495438 348 ntBASIC16.55■□□□□ 0.24
HLA-DOAP06340 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DOAP06340 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOAP06340 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC16.55■□□□□ 0.24
HLA-DOAP06340 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DOAP06340 AC010976.2-201ENST00000609697 852 ntBASIC16.55■□□□□ 0.24
HLA-DOAP06340 BAP1-211ENST00000615113 489 ntBASIC16.55■□□□□ 0.24
HLA-DOAP06340 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HLA-DOAP06340 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOAP06340 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
HLA-DOAP06340 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOAP06340 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-DOAP06340 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOAP06340 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOAP06340 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HLA-DOAP06340 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DOAP06340 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOAP06340 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DOAP06340 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HLA-DOAP06340 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HLA-DOAP06340 RCC2P1-201ENST00000452257 1476 ntBASIC16.54■□□□□ 0.24
HLA-DOAP06340 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 LINC02486-201ENST00000604157 3000 ntBASIC16.54■□□□□ 0.24
HLA-DOAP06340 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 FUCA1P1-201ENST00000374476 1351 ntBASIC16.54■□□□□ 0.24
HLA-DOAP06340 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 AC108734.2-201ENST00000420887 1069 ntBASIC16.54■□□□□ 0.24
HLA-DOAP06340 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.54■□□□□ 0.24
HLA-DOAP06340 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 AC015909.5-201ENST00000624336 2266 ntBASIC16.54■□□□□ 0.24
HLA-DOAP06340 AL365209.1-201ENST00000624418 6473 ntBASIC16.54■□□□□ 0.24
HLA-DOAP06340 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DOAP06340 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOAP06340 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-DOAP06340 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DOAP06340 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-DOAP06340 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DOAP06340 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DOAP06340 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
HLA-DOAP06340 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DOAP06340 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DOAP06340 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DOAP06340 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DOAP06340 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DOAP06340 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HLA-DOAP06340 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DOAP06340 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DOAP06340 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DOAP06340 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DOAP06340 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DOAP06340 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DOAP06340 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DOAP06340 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HLA-DOAP06340 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
HLA-DOAP06340 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HLA-DOAP06340 ABCD1P4-201ENST00000399687 604 ntBASIC16.53■□□□□ 0.24
HLA-DOAP06340 AC073210.1-201ENST00000414799 232 ntBASIC16.53■□□□□ 0.24
HLA-DOAP06340 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-DOAP06340 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DOAP06340 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.53■□□□□ 0.24
HLA-DOAP06340 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HLA-DOAP06340 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DOAP06340 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.53■□□□□ 0.24
HLA-DOAP06340 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms