Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.8■■□□□ 1.4
HCFC2Q9Y5Z7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HCFC2Q9Y5Z7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
HCFC2Q9Y5Z7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HCFC2Q9Y5Z7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HCFC2Q9Y5Z7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HCFC2Q9Y5Z7 AC004911.1-201ENST00000416316 871 ntBASIC23.79■■□□□ 1.4
HCFC2Q9Y5Z7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.79■■□□□ 1.4
HCFC2Q9Y5Z7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.79■■□□□ 1.4
HCFC2Q9Y5Z7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
HCFC2Q9Y5Z7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.79■■□□□ 1.4
HCFC2Q9Y5Z7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.79■■□□□ 1.4
HCFC2Q9Y5Z7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
HCFC2Q9Y5Z7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.79■■□□□ 1.4
HCFC2Q9Y5Z7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HCFC2Q9Y5Z7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HCFC2Q9Y5Z7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.78■■□□□ 1.4
HCFC2Q9Y5Z7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HCFC2Q9Y5Z7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
HCFC2Q9Y5Z7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.78■■□□□ 1.4
HCFC2Q9Y5Z7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.78■■□□□ 1.4
HCFC2Q9Y5Z7 AL354811.1-201ENST00000610286 706 ntBASIC23.78■■□□□ 1.4
HCFC2Q9Y5Z7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
HCFC2Q9Y5Z7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
HCFC2Q9Y5Z7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
HCFC2Q9Y5Z7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
HCFC2Q9Y5Z7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
HCFC2Q9Y5Z7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HCFC2Q9Y5Z7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HCFC2Q9Y5Z7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
HCFC2Q9Y5Z7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HCFC2Q9Y5Z7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.77■■□□□ 1.4
HCFC2Q9Y5Z7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HCFC2Q9Y5Z7 CCDC92B-201ENST00000575506 885 ntBASIC23.77■■□□□ 1.4
HCFC2Q9Y5Z7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HCFC2Q9Y5Z7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.77■■□□□ 1.4
HCFC2Q9Y5Z7 AC145676.1-201ENST00000514988 2004 ntBASIC23.77■■□□□ 1.4
HCFC2Q9Y5Z7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
HCFC2Q9Y5Z7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HCFC2Q9Y5Z7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HCFC2Q9Y5Z7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HCFC2Q9Y5Z7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.76■■□□□ 1.39
HCFC2Q9Y5Z7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.76■■□□□ 1.39
HCFC2Q9Y5Z7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.76■■□□□ 1.39
HCFC2Q9Y5Z7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HCFC2Q9Y5Z7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.76■■□□□ 1.39
HCFC2Q9Y5Z7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HCFC2Q9Y5Z7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.75■■□□□ 1.39
HCFC2Q9Y5Z7 AC133637.1-201ENST00000624115 1537 ntBASIC23.75■■□□□ 1.39
HCFC2Q9Y5Z7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.75■■□□□ 1.39
HCFC2Q9Y5Z7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.75■■□□□ 1.39
HCFC2Q9Y5Z7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.75■■□□□ 1.39
HCFC2Q9Y5Z7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.75■■□□□ 1.39
HCFC2Q9Y5Z7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.75■■□□□ 1.39
HCFC2Q9Y5Z7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HCFC2Q9Y5Z7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HCFC2Q9Y5Z7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.75■■□□□ 1.39
HCFC2Q9Y5Z7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.74■■□□□ 1.39
HCFC2Q9Y5Z7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.74■■□□□ 1.39
HCFC2Q9Y5Z7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.74■■□□□ 1.39
HCFC2Q9Y5Z7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HCFC2Q9Y5Z7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
HCFC2Q9Y5Z7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.74■■□□□ 1.39
HCFC2Q9Y5Z7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.74■■□□□ 1.39
HCFC2Q9Y5Z7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HCFC2Q9Y5Z7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
HCFC2Q9Y5Z7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.73■■□□□ 1.39
HCFC2Q9Y5Z7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HCFC2Q9Y5Z7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
HCFC2Q9Y5Z7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
HCFC2Q9Y5Z7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
HCFC2Q9Y5Z7 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.73■■□□□ 1.39
HCFC2Q9Y5Z7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.73■■□□□ 1.39
HCFC2Q9Y5Z7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.73■■□□□ 1.39
HCFC2Q9Y5Z7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.73■■□□□ 1.39
HCFC2Q9Y5Z7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HCFC2Q9Y5Z7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
HCFC2Q9Y5Z7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
HCFC2Q9Y5Z7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
HCFC2Q9Y5Z7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.73■■□□□ 1.39
HCFC2Q9Y5Z7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.72■■□□□ 1.39
HCFC2Q9Y5Z7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
HCFC2Q9Y5Z7 NTF6G-201ENST00000591094 616 ntBASIC23.72■■□□□ 1.39
HCFC2Q9Y5Z7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HCFC2Q9Y5Z7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.72■■□□□ 1.39
HCFC2Q9Y5Z7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HCFC2Q9Y5Z7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
HCFC2Q9Y5Z7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
HCFC2Q9Y5Z7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
HCFC2Q9Y5Z7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.71■■□□□ 1.39
HCFC2Q9Y5Z7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.71■■□□□ 1.39
HCFC2Q9Y5Z7 KRT18P14-201ENST00000534205 1250 ntBASIC23.71■■□□□ 1.39
HCFC2Q9Y5Z7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
HCFC2Q9Y5Z7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
HCFC2Q9Y5Z7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.7■■□□□ 1.38
HCFC2Q9Y5Z7 ID1-201ENST00000376105 1233 ntBASIC23.7■■□□□ 1.38
HCFC2Q9Y5Z7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HCFC2Q9Y5Z7 TERF1P2-201ENST00000583350 1212 ntBASIC23.7■■□□□ 1.38
HCFC2Q9Y5Z7 AL499627.2-201ENST00000606283 725 ntBASIC23.7■■□□□ 1.38
HCFC2Q9Y5Z7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms