Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RTFDC1Q9BY42 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
RTFDC1Q9BY42 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
RTFDC1Q9BY42 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RTFDC1Q9BY42 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RTFDC1Q9BY42 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RTFDC1Q9BY42 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
RTFDC1Q9BY42 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
RTFDC1Q9BY42 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
RTFDC1Q9BY42 AC012414.1-201ENST00000556676 535 ntBASIC27.68■■■□□ 2.02
RTFDC1Q9BY42 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
RTFDC1Q9BY42 HLA-L-211ENST00000482052 1765 ntBASIC27.68■■■□□ 2.02
RTFDC1Q9BY42 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RTFDC1Q9BY42 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC27.67■■■□□ 2.02
RTFDC1Q9BY42 AL354811.1-201ENST00000610286 706 ntBASIC27.67■■■□□ 2.02
RTFDC1Q9BY42 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC27.67■■■□□ 2.02
RTFDC1Q9BY42 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RTFDC1Q9BY42 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RTFDC1Q9BY42 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RTFDC1Q9BY42 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC27.67■■■□□ 2.02
RTFDC1Q9BY42 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RTFDC1Q9BY42 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RTFDC1Q9BY42 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC27.66■■■□□ 2.02
RTFDC1Q9BY42 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC27.66■■■□□ 2.02
RTFDC1Q9BY42 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC27.66■■■□□ 2.02
RTFDC1Q9BY42 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC27.66■■■□□ 2.02
RTFDC1Q9BY42 MIR6084-201ENST00000622012 110 ntBASIC27.66■■■□□ 2.02
RTFDC1Q9BY42 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RTFDC1Q9BY42 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RTFDC1Q9BY42 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC27.65■■■□□ 2.02
RTFDC1Q9BY42 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC27.65■■■□□ 2.02
RTFDC1Q9BY42 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC27.65■■■□□ 2.02
RTFDC1Q9BY42 CCDC92B-201ENST00000575506 885 ntBASIC27.65■■■□□ 2.02
RTFDC1Q9BY42 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
RTFDC1Q9BY42 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RTFDC1Q9BY42 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC27.65■■■□□ 2.02
RTFDC1Q9BY42 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC27.65■■■□□ 2.02
RTFDC1Q9BY42 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
RTFDC1Q9BY42 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC27.64■■■□□ 2.02
RTFDC1Q9BY42 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
RTFDC1Q9BY42 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
RTFDC1Q9BY42 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
RTFDC1Q9BY42 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
RTFDC1Q9BY42 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
RTFDC1Q9BY42 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.01
RTFDC1Q9BY42 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RTFDC1Q9BY42 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC27.63■■■□□ 2.01
RTFDC1Q9BY42 DLX3-202ENST00000512495 834 ntTSL 2 BASIC27.63■■■□□ 2.01
RTFDC1Q9BY42 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RTFDC1Q9BY42 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC27.63■■■□□ 2.01
RTFDC1Q9BY42 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC27.63■■■□□ 2.01
RTFDC1Q9BY42 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
RTFDC1Q9BY42 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RTFDC1Q9BY42 EI24-204ENST00000527235 1625 ntTSL 5 BASIC27.63■■■□□ 2.01
RTFDC1Q9BY42 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC27.62■■■□□ 2.01
RTFDC1Q9BY42 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
RTFDC1Q9BY42 AC004911.1-201ENST00000416316 871 ntBASIC27.62■■■□□ 2.01
RTFDC1Q9BY42 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC27.62■■■□□ 2.01
RTFDC1Q9BY42 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC27.62■■■□□ 2.01
RTFDC1Q9BY42 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.62■■■□□ 2.01
RTFDC1Q9BY42 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
RTFDC1Q9BY42 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
RTFDC1Q9BY42 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC27.61■■■□□ 2.01
RTFDC1Q9BY42 TERF1P2-201ENST00000583350 1212 ntBASIC27.61■■■□□ 2.01
RTFDC1Q9BY42 AL499627.2-201ENST00000606283 725 ntBASIC27.61■■■□□ 2.01
RTFDC1Q9BY42 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
RTFDC1Q9BY42 AC133637.1-201ENST00000624115 1537 ntBASIC27.61■■■□□ 2.01
RTFDC1Q9BY42 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
RTFDC1Q9BY42 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
RTFDC1Q9BY42 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
RTFDC1Q9BY42 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
RTFDC1Q9BY42 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC27.6■■■□□ 2.01
RTFDC1Q9BY42 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC27.6■■■□□ 2.01
RTFDC1Q9BY42 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
RTFDC1Q9BY42 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
RTFDC1Q9BY42 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
RTFDC1Q9BY42 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC27.6■■■□□ 2.01
RTFDC1Q9BY42 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC27.6■■■□□ 2.01
RTFDC1Q9BY42 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
RTFDC1Q9BY42 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
RTFDC1Q9BY42 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
RTFDC1Q9BY42 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RTFDC1Q9BY42 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
RTFDC1Q9BY42 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
RTFDC1Q9BY42 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC27.59■■■□□ 2.01
RTFDC1Q9BY42 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC27.59■■■□□ 2.01
RTFDC1Q9BY42 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC27.59■■■□□ 2.01
RTFDC1Q9BY42 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC27.59■■■□□ 2.01
RTFDC1Q9BY42 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
RTFDC1Q9BY42 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC27.59■■■□□ 2.01
RTFDC1Q9BY42 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
RTFDC1Q9BY42 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
RTFDC1Q9BY42 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2.01
RTFDC1Q9BY42 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC27.58■■■□□ 2.01
RTFDC1Q9BY42 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC27.58■■■□□ 2.01
RTFDC1Q9BY42 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
RTFDC1Q9BY42 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27.58■■■□□ 2.01
RTFDC1Q9BY42 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC27.58■■■□□ 2
RTFDC1Q9BY42 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
RTFDC1Q9BY42 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC27.57■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms