Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC141586.4-201ENST00000624558 1573 ntBASIC30.56■■■□□ 2.48
ABCA3Q99758 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
ABCA3Q99758 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC30.56■■■□□ 2.48
ABCA3Q99758 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC30.56■■■□□ 2.48
ABCA3Q99758 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC30.56■■■□□ 2.48
ABCA3Q99758 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
ABCA3Q99758 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ABCA3Q99758 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
ABCA3Q99758 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC30.56■■■□□ 2.48
ABCA3Q99758 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ABCA3Q99758 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ABCA3Q99758 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
ABCA3Q99758 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
ABCA3Q99758 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
ABCA3Q99758 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ABCA3Q99758 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC30.55■■■□□ 2.48
ABCA3Q99758 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC30.55■■■□□ 2.48
ABCA3Q99758 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.55■■■□□ 2.48
ABCA3Q99758 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ABCA3Q99758 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ABCA3Q99758 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
ABCA3Q99758 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
ABCA3Q99758 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
ABCA3Q99758 AC016769.1-201ENST00000409132 1010 ntBASIC30.54■■■□□ 2.48
ABCA3Q99758 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC30.54■■■□□ 2.48
ABCA3Q99758 GXYLT1P5-201ENST00000614548 1189 ntBASIC30.54■■■□□ 2.48
ABCA3Q99758 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC30.54■■■□□ 2.48
ABCA3Q99758 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC30.54■■■□□ 2.48
ABCA3Q99758 AC133637.1-201ENST00000624115 1537 ntBASIC30.54■■■□□ 2.48
ABCA3Q99758 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ABCA3Q99758 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC30.54■■■□□ 2.48
ABCA3Q99758 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
ABCA3Q99758 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ABCA3Q99758 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
ABCA3Q99758 CDCA4P2-201ENST00000441182 718 ntBASIC30.53■■■□□ 2.48
ABCA3Q99758 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC30.53■■■□□ 2.48
ABCA3Q99758 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC30.53■■■□□ 2.48
ABCA3Q99758 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC30.53■■■□□ 2.48
ABCA3Q99758 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC30.53■■■□□ 2.48
ABCA3Q99758 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.53■■■□□ 2.48
ABCA3Q99758 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
ABCA3Q99758 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ABCA3Q99758 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC30.53■■■□□ 2.48
ABCA3Q99758 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
ABCA3Q99758 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.52■■■□□ 2.48
ABCA3Q99758 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC30.52■■■□□ 2.48
ABCA3Q99758 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
ABCA3Q99758 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC30.52■■■□□ 2.48
ABCA3Q99758 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.48
ABCA3Q99758 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC30.51■■■□□ 2.48
ABCA3Q99758 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
ABCA3Q99758 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
ABCA3Q99758 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC30.5■■■□□ 2.47
ABCA3Q99758 AP005435.1-201ENST00000529293 1178 ntBASIC30.5■■■□□ 2.47
ABCA3Q99758 AC080038.1-201ENST00000611274 1154 ntBASIC30.5■■■□□ 2.47
ABCA3Q99758 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
ABCA3Q99758 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
ABCA3Q99758 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
ABCA3Q99758 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
ABCA3Q99758 MIR663A-201ENST00000385250 93 ntBASIC30.49■■■□□ 2.47
ABCA3Q99758 LHPP-203ENST00000392757 840 ntTSL 3 BASIC30.49■■■□□ 2.47
ABCA3Q99758 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC30.49■■■□□ 2.47
ABCA3Q99758 AC137761.2-201ENST00000561729 223 ntBASIC30.49■■■□□ 2.47
ABCA3Q99758 AC145350.3-201ENST00000569033 163 ntBASIC30.49■■■□□ 2.47
ABCA3Q99758 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
ABCA3Q99758 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
ABCA3Q99758 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
ABCA3Q99758 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
ABCA3Q99758 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC30.48■■■□□ 2.47
ABCA3Q99758 AL499627.2-201ENST00000606283 725 ntBASIC30.48■■■□□ 2.47
ABCA3Q99758 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
ABCA3Q99758 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC30.48■■■□□ 2.47
ABCA3Q99758 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
ABCA3Q99758 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.48■■■□□ 2.47
ABCA3Q99758 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
ABCA3Q99758 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
ABCA3Q99758 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC30.47■■■□□ 2.47
ABCA3Q99758 AL355802.2-201ENST00000402069 882 ntBASIC30.47■■■□□ 2.47
ABCA3Q99758 DBI-210ENST00000542275 757 ntTSL 5 BASIC30.47■■■□□ 2.47
ABCA3Q99758 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
ABCA3Q99758 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
ABCA3Q99758 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
ABCA3Q99758 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC30.47■■■□□ 2.47
ABCA3Q99758 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC30.47■■■□□ 2.47
ABCA3Q99758 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC30.47■■■□□ 2.47
ABCA3Q99758 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC30.47■■■□□ 2.47
ABCA3Q99758 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
ABCA3Q99758 LINC02228-203ENST00000641970 1355 ntBASIC30.46■■■□□ 2.47
ABCA3Q99758 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
ABCA3Q99758 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
ABCA3Q99758 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
ABCA3Q99758 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC30.46■■■□□ 2.47
ABCA3Q99758 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC30.46■■■□□ 2.47
ABCA3Q99758 WWOX-218ENST00000627394 894 ntTSL 5 BASIC30.46■■■□□ 2.47
ABCA3Q99758 ESRRAP2-201ENST00000418437 1549 ntBASIC30.46■■■□□ 2.47
ABCA3Q99758 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC30.46■■■□□ 2.47
ABCA3Q99758 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
ABCA3Q99758 LSR-205ENST00000427250 1606 ntTSL 2 BASIC30.46■■■□□ 2.47
ABCA3Q99758 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
ABCA3Q99758 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC30.45■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms