Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE2Q96FN4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CPNE2Q96FN4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE2Q96FN4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE2Q96FN4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE2Q96FN4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CPNE2Q96FN4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE2Q96FN4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE2Q96FN4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE2Q96FN4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE2Q96FN4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CPNE2Q96FN4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE2Q96FN4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CPNE2Q96FN4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE2Q96FN4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CPNE2Q96FN4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE2Q96FN4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.41■□□□□ 0.7
CPNE2Q96FN4 AC120024.1-201ENST00000562672 995 ntBASIC19.41■□□□□ 0.7
CPNE2Q96FN4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.41■□□□□ 0.7
CPNE2Q96FN4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.41■□□□□ 0.7
CPNE2Q96FN4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.41■□□□□ 0.7
CPNE2Q96FN4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CPNE2Q96FN4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.41■□□□□ 0.7
CPNE2Q96FN4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE2Q96FN4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE2Q96FN4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE2Q96FN4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE2Q96FN4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE2Q96FN4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE2Q96FN4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CPNE2Q96FN4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE2Q96FN4 KRT18P24-201ENST00000344739 1156 ntBASIC19.4■□□□□ 0.7
CPNE2Q96FN4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.4■□□□□ 0.7
CPNE2Q96FN4 DUX4L18-201ENST00000553347 1267 ntBASIC19.4■□□□□ 0.7
CPNE2Q96FN4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.4■□□□□ 0.7
CPNE2Q96FN4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE2Q96FN4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE2Q96FN4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE2Q96FN4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE2Q96FN4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CPNE2Q96FN4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.39■□□□□ 0.7
CPNE2Q96FN4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE2Q96FN4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.39■□□□□ 0.69
CPNE2Q96FN4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE2Q96FN4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CPNE2Q96FN4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE2Q96FN4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.39■□□□□ 0.69
CPNE2Q96FN4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE2Q96FN4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.39■□□□□ 0.69
CPNE2Q96FN4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.39■□□□□ 0.69
CPNE2Q96FN4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CPNE2Q96FN4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE2Q96FN4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE2Q96FN4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE2Q96FN4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE2Q96FN4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE2Q96FN4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE2Q96FN4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE2Q96FN4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE2Q96FN4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.38■□□□□ 0.69
CPNE2Q96FN4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE2Q96FN4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CPNE2Q96FN4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE2Q96FN4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE2Q96FN4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CPNE2Q96FN4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.38■□□□□ 0.69
CPNE2Q96FN4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CPNE2Q96FN4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.38■□□□□ 0.69
CPNE2Q96FN4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.38■□□□□ 0.69
CPNE2Q96FN4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.38■□□□□ 0.69
CPNE2Q96FN4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.38■□□□□ 0.69
CPNE2Q96FN4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CPNE2Q96FN4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE2Q96FN4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE2Q96FN4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE2Q96FN4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE2Q96FN4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.37■□□□□ 0.69
CPNE2Q96FN4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.37■□□□□ 0.69
CPNE2Q96FN4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE2Q96FN4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE2Q96FN4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.37■□□□□ 0.69
CPNE2Q96FN4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE2Q96FN4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CPNE2Q96FN4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE2Q96FN4 MIR4281-201ENST00000580852 62 ntBASIC19.36■□□□□ 0.69
CPNE2Q96FN4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE2Q96FN4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE2Q96FN4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CPNE2Q96FN4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE2Q96FN4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE2Q96FN4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.36■□□□□ 0.69
CPNE2Q96FN4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CPNE2Q96FN4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE2Q96FN4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE2Q96FN4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE2Q96FN4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE2Q96FN4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE2Q96FN4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE2Q96FN4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE2Q96FN4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms