Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF4Q92544 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF4Q92544 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF4Q92544 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.15■□□□□ 0.98
TM9SF4Q92544 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TM9SF4Q92544 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF4Q92544 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
TM9SF4Q92544 AL031432.3-201ENST00000607698 485 ntBASIC21.15■□□□□ 0.98
TM9SF4Q92544 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF4Q92544 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF4Q92544 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TM9SF4Q92544 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.14■□□□□ 0.97
TM9SF4Q92544 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.14■□□□□ 0.97
TM9SF4Q92544 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TM9SF4Q92544 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TM9SF4Q92544 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TM9SF4Q92544 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TM9SF4Q92544 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM9SF4Q92544 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.13■□□□□ 0.97
TM9SF4Q92544 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM9SF4Q92544 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.13■□□□□ 0.97
TM9SF4Q92544 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.13■□□□□ 0.97
TM9SF4Q92544 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.13■□□□□ 0.97
TM9SF4Q92544 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.13■□□□□ 0.97
TM9SF4Q92544 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.13■□□□□ 0.97
TM9SF4Q92544 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM9SF4Q92544 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.13■□□□□ 0.97
TM9SF4Q92544 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TM9SF4Q92544 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.13■□□□□ 0.97
TM9SF4Q92544 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM9SF4Q92544 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TM9SF4Q92544 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TM9SF4Q92544 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM9SF4Q92544 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM9SF4Q92544 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TM9SF4Q92544 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TM9SF4Q92544 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.12■□□□□ 0.97
TM9SF4Q92544 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.12■□□□□ 0.97
TM9SF4Q92544 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TM9SF4Q92544 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM9SF4Q92544 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TM9SF4Q92544 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM9SF4Q92544 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM9SF4Q92544 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM9SF4Q92544 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TM9SF4Q92544 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TM9SF4Q92544 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.11■□□□□ 0.97
TM9SF4Q92544 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TM9SF4Q92544 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TM9SF4Q92544 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM9SF4Q92544 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM9SF4Q92544 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.11■□□□□ 0.97
TM9SF4Q92544 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TM9SF4Q92544 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM9SF4Q92544 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM9SF4Q92544 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
TM9SF4Q92544 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TM9SF4Q92544 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TM9SF4Q92544 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM9SF4Q92544 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TM9SF4Q92544 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.1■□□□□ 0.97
TM9SF4Q92544 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
TM9SF4Q92544 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM9SF4Q92544 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.09■□□□□ 0.97
TM9SF4Q92544 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM9SF4Q92544 AC105265.2-201ENST00000467189 838 ntBASIC21.09■□□□□ 0.97
TM9SF4Q92544 AC091305.1-201ENST00000479476 895 ntBASIC21.09■□□□□ 0.97
TM9SF4Q92544 AF213884.3-201ENST00000563833 479 ntBASIC21.09■□□□□ 0.97
TM9SF4Q92544 MIR5787-201ENST00000611784 55 ntBASIC21.09■□□□□ 0.97
TM9SF4Q92544 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.09■□□□□ 0.97
TM9SF4Q92544 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TM9SF4Q92544 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.09■□□□□ 0.97
TM9SF4Q92544 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TM9SF4Q92544 AL022069.1-201ENST00000568025 1636 ntBASIC21.08■□□□□ 0.97
TM9SF4Q92544 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TM9SF4Q92544 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TM9SF4Q92544 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.08■□□□□ 0.97
TM9SF4Q92544 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.08■□□□□ 0.97
TM9SF4Q92544 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.08■□□□□ 0.97
TM9SF4Q92544 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.08■□□□□ 0.97
TM9SF4Q92544 AC141586.4-201ENST00000624558 1573 ntBASIC21.08■□□□□ 0.97
TM9SF4Q92544 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.08■□□□□ 0.96
TM9SF4Q92544 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM9SF4Q92544 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM9SF4Q92544 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.07■□□□□ 0.96
TM9SF4Q92544 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM9SF4Q92544 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.07■□□□□ 0.96
TM9SF4Q92544 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM9SF4Q92544 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
TM9SF4Q92544 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM9SF4Q92544 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM9SF4Q92544 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.07■□□□□ 0.96
TM9SF4Q92544 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.07■□□□□ 0.96
TM9SF4Q92544 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TM9SF4Q92544 AL138724.1-201ENST00000606771 1088 ntBASIC21.07■□□□□ 0.96
TM9SF4Q92544 AL136967.2-201ENST00000623968 743 ntBASIC21.07■□□□□ 0.96
TM9SF4Q92544 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.07■□□□□ 0.96
TM9SF4Q92544 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM9SF4Q92544 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM9SF4Q92544 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms