Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
RAPGEF4Q8WZA2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC29.78■■■□□ 2.36
RAPGEF4Q8WZA2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC29.78■■■□□ 2.36
RAPGEF4Q8WZA2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
RAPGEF4Q8WZA2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
RAPGEF4Q8WZA2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
RAPGEF4Q8WZA2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
RAPGEF4Q8WZA2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC29.77■■■□□ 2.36
RAPGEF4Q8WZA2 AC133637.1-201ENST00000624115 1537 ntBASIC29.77■■■□□ 2.36
RAPGEF4Q8WZA2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.77■■■□□ 2.36
RAPGEF4Q8WZA2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
RAPGEF4Q8WZA2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
RAPGEF4Q8WZA2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
RAPGEF4Q8WZA2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC29.77■■■□□ 2.36
RAPGEF4Q8WZA2 IKBKGP1-201ENST00000612193 1073 ntBASIC29.77■■■□□ 2.36
RAPGEF4Q8WZA2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC29.77■■■□□ 2.36
RAPGEF4Q8WZA2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC29.77■■■□□ 2.36
RAPGEF4Q8WZA2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RAPGEF4Q8WZA2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
RAPGEF4Q8WZA2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
RAPGEF4Q8WZA2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
RAPGEF4Q8WZA2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
RAPGEF4Q8WZA2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.36
RAPGEF4Q8WZA2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
RAPGEF4Q8WZA2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
RAPGEF4Q8WZA2 AC027612.3-201ENST00000413684 1047 ntBASIC29.76■■■□□ 2.35
RAPGEF4Q8WZA2 DUX4L2-201ENST00000561772 1275 ntBASIC29.76■■■□□ 2.35
RAPGEF4Q8WZA2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
RAPGEF4Q8WZA2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC29.76■■■□□ 2.35
RAPGEF4Q8WZA2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
RAPGEF4Q8WZA2 DUX4L6-201ENST00000626483 1275 ntBASIC29.76■■■□□ 2.35
RAPGEF4Q8WZA2 DUX4L1-201ENST00000627662 1275 ntBASIC29.76■■■□□ 2.35
RAPGEF4Q8WZA2 DUX4L8-201ENST00000629013 1275 ntBASIC29.76■■■□□ 2.35
RAPGEF4Q8WZA2 DUX4L3-201ENST00000630187 1275 ntBASIC29.76■■■□□ 2.35
RAPGEF4Q8WZA2 DUX4L7-201ENST00000630678 1275 ntBASIC29.76■■■□□ 2.35
RAPGEF4Q8WZA2 DUX4L5-201ENST00000630834 1275 ntBASIC29.76■■■□□ 2.35
RAPGEF4Q8WZA2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC29.76■■■□□ 2.35
RAPGEF4Q8WZA2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
RAPGEF4Q8WZA2 MIR572-201ENST00000384983 95 ntBASIC29.75■■■□□ 2.35
RAPGEF4Q8WZA2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
RAPGEF4Q8WZA2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
RAPGEF4Q8WZA2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC29.75■■■□□ 2.35
RAPGEF4Q8WZA2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC29.75■■■□□ 2.35
RAPGEF4Q8WZA2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC29.75■■■□□ 2.35
RAPGEF4Q8WZA2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC29.74■■■□□ 2.35
RAPGEF4Q8WZA2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC29.74■■■□□ 2.35
RAPGEF4Q8WZA2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC29.74■■■□□ 2.35
RAPGEF4Q8WZA2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
RAPGEF4Q8WZA2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
RAPGEF4Q8WZA2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC29.74■■■□□ 2.35
RAPGEF4Q8WZA2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RAPGEF4Q8WZA2 AC135731.1-201ENST00000569415 2548 ntBASIC29.74■■■□□ 2.35
RAPGEF4Q8WZA2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC29.73■■■□□ 2.35
RAPGEF4Q8WZA2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
RAPGEF4Q8WZA2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RAPGEF4Q8WZA2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC29.73■■■□□ 2.35
RAPGEF4Q8WZA2 AC123595.1-201ENST00000440769 1046 ntBASIC29.73■■■□□ 2.35
RAPGEF4Q8WZA2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC29.73■■■□□ 2.35
RAPGEF4Q8WZA2 MIR6084-201ENST00000622012 110 ntBASIC29.73■■■□□ 2.35
RAPGEF4Q8WZA2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC29.73■■■□□ 2.35
RAPGEF4Q8WZA2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
RAPGEF4Q8WZA2 AC022211.4-201ENST00000625094 2161 ntBASIC29.73■■■□□ 2.35
RAPGEF4Q8WZA2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC29.72■■■□□ 2.35
RAPGEF4Q8WZA2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC29.72■■■□□ 2.35
RAPGEF4Q8WZA2 AC012414.1-201ENST00000556676 535 ntBASIC29.72■■■□□ 2.35
RAPGEF4Q8WZA2 AL499627.2-201ENST00000606283 725 ntBASIC29.72■■■□□ 2.35
RAPGEF4Q8WZA2 RARRES2P11-201ENST00000635158 484 ntBASIC29.72■■■□□ 2.35
RAPGEF4Q8WZA2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
RAPGEF4Q8WZA2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC29.72■■■□□ 2.35
RAPGEF4Q8WZA2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RAPGEF4Q8WZA2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
RAPGEF4Q8WZA2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RAPGEF4Q8WZA2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
RAPGEF4Q8WZA2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC29.71■■■□□ 2.35
RAPGEF4Q8WZA2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
RAPGEF4Q8WZA2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
RAPGEF4Q8WZA2 AC090192.1-201ENST00000517740 490 ntBASIC29.71■■■□□ 2.35
RAPGEF4Q8WZA2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
RAPGEF4Q8WZA2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RAPGEF4Q8WZA2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RAPGEF4Q8WZA2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
RAPGEF4Q8WZA2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
RAPGEF4Q8WZA2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
RAPGEF4Q8WZA2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
RAPGEF4Q8WZA2 AP003733.4-201ENST00000623785 1697 ntBASIC29.7■■■□□ 2.35
RAPGEF4Q8WZA2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC29.7■■■□□ 2.35
RAPGEF4Q8WZA2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC29.7■■■□□ 2.35
RAPGEF4Q8WZA2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC29.7■■■□□ 2.35
RAPGEF4Q8WZA2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC29.7■■■□□ 2.35
RAPGEF4Q8WZA2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC29.7■■■□□ 2.35
RAPGEF4Q8WZA2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC29.7■■■□□ 2.35
RAPGEF4Q8WZA2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
RAPGEF4Q8WZA2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
RAPGEF4Q8WZA2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC29.7■■■□□ 2.34
RAPGEF4Q8WZA2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.34
RAPGEF4Q8WZA2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC29.69■■■□□ 2.34
RAPGEF4Q8WZA2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
RAPGEF4Q8WZA2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC29.69■■■□□ 2.34
RAPGEF4Q8WZA2 AL354811.1-201ENST00000610286 706 ntBASIC29.69■■■□□ 2.34
RAPGEF4Q8WZA2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC29.69■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms